Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:174099547-174650683

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46 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bbaa30 1 169211172 to 174628870 5417698 QTL B.burgdorferi-associated arthritis 30
Szs1 1 171051174 to 174628870 3577696 QTL seizure susceptibility 1
Olfr427 1 174099460 to 174100408 948 + protein coding gene olfactory receptor 427
Gm37417 1 174110980 to 174111343 363 + pseudogene predicted gene, 37417
Olfr231 1 174117091 to 174118014 923 - protein coding gene olfactory receptor 231
Olfr424 1 174136746 to 174137693 947 + protein coding gene olfactory receptor 424
Olfr258-ps1 1 174142190 to 174143081 891 + pseudogene olfactory receptor 258, pseudogene 1
Olfr421-ps1 1 174151481 to 174152530 1049 + polymorphic pseudogene olfactory receptor 421, pseudogene 1
Olfr420 1 174158722 to 174159767 1045 + protein coding gene olfactory receptor 420
Gm43440 1 174167702 to 174169724 2022 + pseudogene predicted gene 43440
Gm36196 1 174168604 to 174172654 4050 - lncRNA gene predicted gene, 36196
Tssr10301 1 174172738 to 174172782 44 + TSS region transcription start site region 10301
Spta1 1 174172776 to 174248449 75673 + protein coding gene spectrin alpha, erythrocytic 1
Tssr10302 1 174172810 to 174172857 47 + TSS region transcription start site region 10302
Tssr10303 1 174172888 to 174172916 28 + TSS region transcription start site region 10303
Tssr10304 1 174173807 to 174173813 6 + TSS region transcription start site region 10304
Tssr10305 1 174191056 to 174191062 6 + TSS region transcription start site region 10305
Tssr307 1 174191849 to 174191860 11 + TSS region transcription start site region 307
Tssr10306 1 174211654 to 174211658 4 + TSS region transcription start site region 10306
Tssr10307 1 174215425 to 174215434 9 + TSS region transcription start site region 10307
Tssr15383 1 174240189 to 174240192 3 - TSS region transcription start site region 15383
Olfr419 1 174249889 to 174250976 1087 - protein coding gene olfactory receptor 419
D1Sta12 1 174297942 to 174298073 131 DNA segment DNA segment, Chr 1, Philip Stanier 12
Mptx1 1 174330518 to 174332873 2355 + protein coding gene mucosal pentraxin 1
Tssr10308 1 174330518 to 174330521 3 + TSS region transcription start site region 10308
Olfr417 1 174368919 to 174369848 929 + protein coding gene olfactory receptor 417
Olfr416-ps1 1 174374547 to 174375683 1136 + pseudogene olfactory receptor 416, pseudogene 1
Olfr248 1 174391046 to 174392055 1009 + protein coding gene olfactory receptor 248
Olfr414 1 174430430 to 174431384 954 + protein coding gene olfactory receptor 414
D1Sta13 1 174446409 to 174446560 151 DNA segment DNA segment, Chr 1, Philip Stanier 13
Olfr220 1 174448625 to 174449602 977 + protein coding gene olfactory receptor 220
D1Mit541 1 174472116 to 174472238 122 DNA segment DNA Segment, Chr 1, Massachusetts Institute of Technology 541
Tssr308 1 174497762 to 174497770 8 - TSS region transcription start site region 308
Cpgi1064 1 174501672 to 174503663 1991 CpG island CpG island 1064
Tssr10309 1 174501796 to 174501843 47 + TSS region transcription start site region 10309
Fmn2 1 174501825 to 174822729 320904 + protein coding gene formin 2
Tssr10310 1 174501850 to 174501887 37 + TSS region transcription start site region 10310
Fglu2 1 174628733 to 174628870 137 QTL fasting glucose 2
Cbm1 1 174628733 to 174628870 137 QTL cerebellum weight 1
Gvhd1 1 174628733 to 174628870 137 QTL graft-versus-host disease 1
Bslm4 1 174628733 to 174628870 137 QTL basal locomotor activity 4
Cq2 1 174628733 to 174628870 137 QTL cholesterol QTL 2
D1Mit150 1 174628733 to 174628870 137 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 150
Mnotch 1 174628733 to 174628870 137 QTL modifier of Notch
Melm2 1 174628733 to 174628870 137 QTL melanoma modifier 2
D1Sta14 1 174648173 to 174648252 79 DNA segment DNA segment, Chr 1, Philip Stanier 14