Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:173965430-174896384

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92 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bbaa30 1 169211172 to 174628870 5417698 QTL B.burgdorferi-associated arthritis 30
Szs1 1 171051174 to 174628870 3577696 QTL seizure susceptibility 1
Ifi202b 1 173962568 to 173982744 20176 - protein coding gene interferon activated gene 202B
Tssr15352 1 173971344 to 173971357 13 - TSS region transcription start site region 15352
Tssr15353 1 173971707 to 173971731 24 - TSS region transcription start site region 15353
Tssr15354 1 173974853 to 173974930 77 - TSS region transcription start site region 15354
Tssr15355 1 173974964 to 173975039 75 - TSS region transcription start site region 15355
Tssr306 1 173975046 to 173975056 10 - TSS region transcription start site region 306
Tssr15356 1 173975063 to 173975121 58 - TSS region transcription start site region 15356
Tssr15357 1 173976952 to 173976977 25 - TSS region transcription start site region 15357
Tssr15358 1 173977286 to 173977302 16 - TSS region transcription start site region 15358
Tssr15359 1 173977326 to 173977341 15 - TSS region transcription start site region 15359
Tssr15360 1 173979433 to 173979450 17 - TSS region transcription start site region 15360
Tssr15361 1 173979488 to 173979503 15 - TSS region transcription start site region 15361
Tssr15362 1 173979613 to 173979644 31 - TSS region transcription start site region 15362
Tssr15363 1 173979757 to 173979771 14 - TSS region transcription start site region 15363
Tssr15364 1 173979830 to 173979841 11 - TSS region transcription start site region 15364
Tssr15365 1 173979885 to 173979896 11 - TSS region transcription start site region 15365
Tssr15366 1 173979903 to 173979915 12 - TSS region transcription start site region 15366
Tssr15367 1 173979921 to 173979934 13 - TSS region transcription start site region 15367
Tssr15368 1 173980023 to 173980034 11 - TSS region transcription start site region 15368
Tssr15369 1 173982260 to 173982286 26 - TSS region transcription start site region 15369
Tssr15370 1 173982842 to 173982848 6 - TSS region transcription start site region 15370
Gm18445 1 173986926 to 174001972 15046 - pseudogene predicted gene, 18445
Ifi205 1 174011998 to 174031755 19757 - protein coding gene interferon activated gene 205
Tssr15371 1 174024400 to 174024438 38 - TSS region transcription start site region 15371
Tssr15372 1 174027299 to 174027324 25 - TSS region transcription start site region 15372
Tssr15373 1 174028270 to 174028279 9 - TSS region transcription start site region 15373
Tssr15374 1 174028299 to 174028310 11 - TSS region transcription start site region 15374
Tssr15375 1 174028367 to 174028378 11 - TSS region transcription start site region 15375
Tssr15376 1 174028415 to 174028428 13 - TSS region transcription start site region 15376
Tssr15377 1 174028452 to 174028462 10 - TSS region transcription start site region 15377
Tssr15378 1 174028477 to 174028489 12 - TSS region transcription start site region 15378
Tssr15379 1 174031712 to 174031728 16 - TSS region transcription start site region 15379
Tssr15380 1 174031779 to 174031789 10 - TSS region transcription start site region 15380
Tssr15381 1 174031797 to 174031827 30 - TSS region transcription start site region 15381
Tssr15382 1 174031836 to 174031845 9 - TSS region transcription start site region 15382
Tssr10300 1 174041003 to 174041028 25 + TSS region transcription start site region 10300
Olfr433 1 174041933 to 174042936 1003 + protein coding gene olfactory receptor 433
Olfr432 1 174050375 to 174051313 938 + protein coding gene olfactory receptor 432
Olfr431-ps1 1 174051998 to 174052541 543 + pseudogene olfactory receptor 431, pseudogene 1
Olfr430 1 174069300 to 174070253 953 + protein coding gene olfactory receptor 430
Olfr429 1 174089038 to 174089980 942 + protein coding gene olfactory receptor 429
Olfr428-ps1 1 174094970 to 174095361 391 + pseudogene olfactory receptor 428, pseudogene 1
Olfr427 1 174099460 to 174100408 948 + protein coding gene olfactory receptor 427
Gm37417 1 174110980 to 174111343 363 + pseudogene predicted gene, 37417
Olfr231 1 174117091 to 174118014 923 - protein coding gene olfactory receptor 231
Olfr424 1 174136746 to 174137693 947 + protein coding gene olfactory receptor 424
Olfr258-ps1 1 174142190 to 174143081 891 + pseudogene olfactory receptor 258, pseudogene 1
Olfr421-ps1 1 174151481 to 174152530 1049 + polymorphic pseudogene olfactory receptor 421, pseudogene 1
Olfr420 1 174158722 to 174159767 1045 + protein coding gene olfactory receptor 420
Gm43440 1 174167702 to 174169724 2022 + pseudogene predicted gene 43440
Gm36196 1 174168604 to 174172654 4050 - lncRNA gene predicted gene, 36196
Tssr10301 1 174172738 to 174172782 44 + TSS region transcription start site region 10301
Spta1 1 174172776 to 174248449 75673 + protein coding gene spectrin alpha, erythrocytic 1
Tssr10302 1 174172810 to 174172857 47 + TSS region transcription start site region 10302
Tssr10303 1 174172888 to 174172916 28 + TSS region transcription start site region 10303
Tssr10304 1 174173807 to 174173813 6 + TSS region transcription start site region 10304
Tssr10305 1 174191056 to 174191062 6 + TSS region transcription start site region 10305
Tssr307 1 174191849 to 174191860 11 + TSS region transcription start site region 307
Tssr10306 1 174211654 to 174211658 4 + TSS region transcription start site region 10306
Tssr10307 1 174215425 to 174215434 9 + TSS region transcription start site region 10307
Tssr15383 1 174240189 to 174240192 3 - TSS region transcription start site region 15383
Olfr419 1 174249889 to 174250976 1087 - protein coding gene olfactory receptor 419
D1Sta12 1 174297942 to 174298073 131 DNA segment DNA segment, Chr 1, Philip Stanier 12
Mptx1 1 174330518 to 174332873 2355 + protein coding gene mucosal pentraxin 1
Tssr10308 1 174330518 to 174330521 3 + TSS region transcription start site region 10308
Olfr417 1 174368919 to 174369848 929 + protein coding gene olfactory receptor 417
Olfr416-ps1 1 174374547 to 174375683 1136 + pseudogene olfactory receptor 416, pseudogene 1
Olfr248 1 174391046 to 174392055 1009 + protein coding gene olfactory receptor 248
Olfr414 1 174430430 to 174431384 954 + protein coding gene olfactory receptor 414
D1Sta13 1 174446409 to 174446560 151 DNA segment DNA segment, Chr 1, Philip Stanier 13
Olfr220 1 174448625 to 174449602 977 + protein coding gene olfactory receptor 220
D1Mit541 1 174472116 to 174472238 122 DNA segment DNA Segment, Chr 1, Massachusetts Institute of Technology 541
Tssr308 1 174497762 to 174497770 8 - TSS region transcription start site region 308
Cpgi1064 1 174501672 to 174503663 1991 CpG island CpG island 1064
Tssr10309 1 174501796 to 174501843 47 + TSS region transcription start site region 10309
Fmn2 1 174501825 to 174822729 320904 + protein coding gene formin 2
Tssr10310 1 174501850 to 174501887 37 + TSS region transcription start site region 10310
Mnotch 1 174628733 to 174628870 137 QTL modifier of Notch
Melm2 1 174628733 to 174628870 137 QTL melanoma modifier 2
Gvhd1 1 174628733 to 174628870 137 QTL graft-versus-host disease 1
Fglu2 1 174628733 to 174628870 137 QTL fasting glucose 2
Cbm1 1 174628733 to 174628870 137 QTL cerebellum weight 1
D1Mit150 1 174628733 to 174628870 137 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 150
Bslm4 1 174628733 to 174628870 137 QTL basal locomotor activity 4
Cq2 1 174628733 to 174628870 137 QTL cholesterol QTL 2
D1Sta14 1 174648173 to 174648252 79 DNA segment DNA segment, Chr 1, Philip Stanier 14
Gm18408 1 174683815 to 174684601 786 + pseudogene predicted gene, 18408
Tssr10311 1 174751646 to 174751651 5 + TSS region transcription start site region 10311
Grem2 1 174833785 to 174921819 88034 - protein coding gene gremlin 2, DAN family BMP antagonist
Cpgi1065 1 174836766 to 174837218 452 CpG island CpG island 1065