Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:173446441-173836454

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90 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Aim2 1 173350879 to 173466040 115161 + protein coding gene absent in melanoma 2
Bmd5a 1 173368361 to 173508588 140227 QTL bone mineral density 5a
D1Sta6 1 173451821 to 173451885 64 DNA segment DNA segment, Chr 1, Philip Stanier 6
Ifi206 1 173468485 to 173491041 22556 - protein coding gene interferon activated gene 206
Tssr15277 1 173490933 to 173490940 7 - TSS region transcription start site region 15277
Ifi214 1 173521311 to 173535957 14646 - protein coding gene interferon activated gene 214
Gm44481 1 173524086 to 173524169 83 + miRNA gene predicted gene, 44481
Tssr15278 1 173526230 to 173526241 11 - TSS region transcription start site region 15278
Tssr15279 1 173535985 to 173536030 45 - TSS region transcription start site region 15279
Ifi213 1 173566595 to 173599302 32707 - protein coding gene interferon activated gene 213
Tssr15280 1 173599243 to 173599277 34 - TSS region transcription start site region 15280
Tssr10277 1 173630813 to 173630834 21 + TSS region transcription start site region 10277
Tssr10278 1 173630847 to 173630882 35 + TSS region transcription start site region 10278
Tssr10279 1 173630894 to 173630897 3 + TSS region transcription start site region 10279
Ifi209 1 173630917 to 173647928 17011 + protein coding gene interferon activated gene 209
Tssr10280 1 173631005 to 173631018 13 + TSS region transcription start site region 10280
Tssr10281 1 173631027 to 173631068 41 + TSS region transcription start site region 10281
Tssr10282 1 173631070 to 173631080 10 + TSS region transcription start site region 10282
Tssr10283 1 173631107 to 173631126 19 + TSS region transcription start site region 10283
Tssr10284 1 173633676 to 173633683 7 + TSS region transcription start site region 10284
Tssr10285 1 173641208 to 173641221 13 + TSS region transcription start site region 10285
Tssr10286 1 173641289 to 173641313 24 + TSS region transcription start site region 10286
Tssr10287 1 173641403 to 173641420 17 + TSS region transcription start site region 10287
Tssr10288 1 173641426 to 173641436 10 + TSS region transcription start site region 10288
Tssr10289 1 173641441 to 173641454 13 + TSS region transcription start site region 10289
Tssr10290 1 173641462 to 173641478 16 + TSS region transcription start site region 10290
Gm44339 1 173643511 to 173643594 83 - miRNA gene predicted gene, 44339
Tssr10291 1 173647826 to 173647846 20 + TSS region transcription start site region 10291
Tssr305 1 173673628 to 173673637 9 + TSS region transcription start site region 305
Tssr10292 1 173673651 to 173673686 35 + TSS region transcription start site region 10292
Ifi208 1 173673675 to 173698395 24720 + protein coding gene interferon activated gene 208
Tssr10293 1 173673702 to 173673710 8 + TSS region transcription start site region 10293
Tssr10294 1 173673783 to 173673808 25 + TSS region transcription start site region 10294
Tssr10295 1 173673901 to 173673916 15 + TSS region transcription start site region 10295
Gm18752 1 173701385 to 173704063 2678 + pseudogene predicted gene, 18752
Cpgi1063 1 173712067 to 173712281 214 CpG island CpG island 1063
Gm7871 1 173712735 to 173715660 2925 - pseudogene predicted gene 7871
Ifi207 1 173723427 to 173741747 18320 - protein coding gene interferon activated gene 207
Tssr10296 1 173729098 to 173729131 33 + TSS region transcription start site region 10296
Tssr10297 1 173729141 to 173729157 16 + TSS region transcription start site region 10297
Tssr15281 1 173729142 to 173729196 54 - TSS region transcription start site region 15281
Tssr15282 1 173729314 to 173729321 7 - TSS region transcription start site region 15282
Tssr15283 1 173729354 to 173729365 11 - TSS region transcription start site region 15283
Tssr15284 1 173729456 to 173729467 11 - TSS region transcription start site region 15284
Tssr15285 1 173729492 to 173729540 48 - TSS region transcription start site region 15285
Tssr15286 1 173729541 to 173729566 25 - TSS region transcription start site region 15286
Tssr15287 1 173729569 to 173729582 13 - TSS region transcription start site region 15287
Tssr15288 1 173729631 to 173729642 11 - TSS region transcription start site region 15288
Tssr15289 1 173729748 to 173729770 22 - TSS region transcription start site region 15289
Tssr15290 1 173729919 to 173729940 21 - TSS region transcription start site region 15290
Tssr15291 1 173730034 to 173730045 11 - TSS region transcription start site region 15291
Tssr15292 1 173730049 to 173730079 30 - TSS region transcription start site region 15292
Tssr15293 1 173730088 to 173730119 31 - TSS region transcription start site region 15293
Tssr15294 1 173730140 to 173730160 20 - TSS region transcription start site region 15294
Tssr15295 1 173730171 to 173730204 33 - TSS region transcription start site region 15295
Tssr15296 1 173730431 to 173730440 9 - TSS region transcription start site region 15296
Tssr10298 1 173730478 to 173730510 32 + TSS region transcription start site region 10298
Tssr15297 1 173732371 to 173732395 24 - TSS region transcription start site region 15297
Tssr15298 1 173732708 to 173732716 8 - TSS region transcription start site region 15298
Tssr10299 1 173735210 to 173735218 8 + TSS region transcription start site region 10299
Tssr15299 1 173735216 to 173735226 10 - TSS region transcription start site region 15299
Tssr15300 1 173737941 to 173737953 12 - TSS region transcription start site region 15300
Tssr15301 1 173738110 to 173738122 12 - TSS region transcription start site region 15301
Tssr15302 1 173738186 to 173738200 14 - TSS region transcription start site region 15302
Tssr15303 1 173738894 to 173738919 25 - TSS region transcription start site region 15303
Tssr15304 1 173741007 to 173741027 20 - TSS region transcription start site region 15304
Tssr15305 1 173741690 to 173741701 11 - TSS region transcription start site region 15305
Tssr15306 1 173741717 to 173741755 38 - TSS region transcription start site region 15306
Tssr15307 1 173741758 to 173741786 28 - TSS region transcription start site region 15307
Tssr15308 1 173741795 to 173741817 22 - TSS region transcription start site region 15308
Ifi204 1 173747293 to 173766943 19650 - protein coding gene interferon activated gene 204
Tssr15309 1 173748078 to 173748092 14 - TSS region transcription start site region 15309
Tssr15310 1 173748206 to 173748209 3 - TSS region transcription start site region 15310
Tssr15311 1 173748281 to 173748293 12 - TSS region transcription start site region 15311
Tssr15312 1 173748877 to 173748888 11 - TSS region transcription start site region 15312
Tssr15313 1 173748932 to 173748951 19 - TSS region transcription start site region 15313
Tssr15314 1 173755933 to 173755953 20 - TSS region transcription start site region 15314
Tssr15315 1 173760167 to 173760207 40 - TSS region transcription start site region 15315
Tssr15316 1 173766901 to 173766928 27 - TSS region transcription start site region 15316
Tssr15317 1 173766945 to 173766979 34 - TSS region transcription start site region 15317
Tssr15318 1 173766986 to 173766997 11 - TSS region transcription start site region 15318
Tssr15319 1 173767026 to 173767044 18 - TSS region transcription start site region 15319
Tssr15320 1 173775298 to 173775312 14 - TSS region transcription start site region 15320
Ifi203-ps 1 173776529 to 173798270 21741 - pseudogene interferon activated gene 203, pseudogene
Tssr15321 1 173782985 to 173782994 9 - TSS region transcription start site region 15321
Tssr15322 1 173787230 to 173787233 3 - TSS region transcription start site region 15322
Tssr15323 1 173798112 to 173798117 5 - TSS region transcription start site region 15323
Tssr15324 1 173802711 to 173802730 19 - TSS region transcription start site region 15324
Tssr15325 1 173802740 to 173802760 20 - TSS region transcription start site region 15325
Gm7897 1 173829799 to 173832254 2455 - pseudogene predicted gene 7897