Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:173268556-173398580

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Olfr418 1 173270147 to 173271137 990 + protein coding gene olfactory receptor 418
Mptx2 1 173274461 to 173277756 3295 - protein coding gene mucosal pentraxin 2
Ackr1 1 173331886 to 173333503 1617 - protein coding gene atypical chemokine receptor 1 (Duffy blood group)
Tssr15259 1 173333370 to 173333383 13 - TSS region transcription start site region 15259
Tssr15260 1 173333410 to 173333422 12 - TSS region transcription start site region 15260
Tssr15261 1 173333459 to 173333471 12 - TSS region transcription start site region 15261
Tssr15262 1 173333474 to 173333488 14 - TSS region transcription start site region 15262
Tssr15263 1 173333504 to 173333520 16 - TSS region transcription start site region 15263
Tssr10258 1 173333556 to 173333580 24 + TSS region transcription start site region 10258
Tssr15264 1 173334022 to 173334033 11 - TSS region transcription start site region 15264
Cadm3 1 173334254 to 173367695 33441 - protein coding gene cell adhesion molecule 3
Tssr15265 1 173334528 to 173334531 3 - TSS region transcription start site region 15265
Tssr15266 1 173334917 to 173334938 21 - TSS region transcription start site region 15266
Tssr15267 1 173335319 to 173335348 29 - TSS region transcription start site region 15267
Tssr15268 1 173336039 to 173336048 9 - TSS region transcription start site region 15268
Tssr15269 1 173336810 to 173336820 10 - TSS region transcription start site region 15269
Tssr15270 1 173345803 to 173345810 7 - TSS region transcription start site region 15270
Tssr10259 1 173350129 to 173350137 8 + TSS region transcription start site region 10259
Tssr10260 1 173350151 to 173350177 26 + TSS region transcription start site region 10260
Tssr10261 1 173350179 to 173350206 27 + TSS region transcription start site region 10261
Aim2 1 173350879 to 173466040 115161 + protein coding gene absent in melanoma 2
Cpgi1062 1 173366872 to 173368001 1129 CpG island CpG island 1062
Tssr15271 1 173367483 to 173367486 3 - TSS region transcription start site region 15271
Tssr15272 1 173367638 to 173367656 18 - TSS region transcription start site region 15272
Tssr15273 1 173367666 to 173367692 26 - TSS region transcription start site region 15273
Tssr15274 1 173367855 to 173367886 31 - TSS region transcription start site region 15274
Bmd5a 1 173368361 to 173508588 140227 QTL bone mineral density 5a
D1Mit522 1 173382162 to 173382478 316 DNA segment DNA Segment, Chr 1, Massachusetts Institute of Technology-522
n-TRtct5 1 173390329 to 173390402 73 + tRNA gene nuclear encoded tRNA arginine 5 (anticodon TCT)