Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:172856768-173057817

31 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Emrq1	1	171804480 to 172888802	1084322		QTL	emotional reactivity QTL 1
9430083B18Rik	1	172873551 to 172874413	862	+	unclassified gene	RIKEN cDNA 9430083B18 gene
Ssta2	1	172888654 to 172888802	148		QTL	susceptibility to Salmonella typhimurium antigens 2
Cafq1	1	172888654 to 172888802	148		QTL	caffeine metabolism QTL 1
D1Mit356	1	172888654 to 172888802	148		DNA segment	DNA segment, Chr 1, Massachusetts Institute of Technology 356
Tir8	1	172888654 to 172888802	148		QTL	trypanosome infection response 8
Apcs	1	172893961 to 172895041	1080	-	protein coding gene	serum amyloid P-component
Cplaq3	1	172893961 to 172895041	1080		QTL	circadian period of locomotor activity 3
Tssr15250	1	172894580 to 172894597	17	-	TSS region	transcription start site region 15250
Tssr15251	1	172894598 to 172894603	5	-	TSS region	transcription start site region 15251
Tssr304	1	172894905 to 172894912	7	-	TSS region	transcription start site region 304
Tssr15252	1	172894925 to 172894958	33	-	TSS region	transcription start site region 15252
Tssr15253	1	172894968 to 172894980	12	-	TSS region	transcription start site region 15253
Tssr15254	1	172894983 to 172895003	20	-	TSS region	transcription start site region 15254
Tssr15255	1	172895008 to 172895015	7	-	TSS region	transcription start site region 15255
Tssr15256	1	172895025 to 172895044	19	-	TSS region	transcription start site region 15256
Tssr15257	1	172895048 to 172895063	15	-	TSS region	transcription start site region 15257
Gm35686	1	172930028 to 172960263	30235	+	lncRNA gene	predicted gene, 35686
Tssr10256	1	172930038 to 172930053	15	+	TSS region	transcription start site region 10256
Gm26077	1	172936212 to 172936334	122	-	snoRNA gene	predicted gene, 26077
Olfr16	1	172956768 to 172957817	1049	+	protein coding gene	olfactory receptor 16
Gm35742	1	172989431 to 172997844	8413	+	lncRNA gene	predicted gene, 35742
Tssr10257	1	172990315 to 172990337	22	+	TSS region	transcription start site region 10257
Sle21	1	173004198 to 173004325	127		QTL	systematic lupus erythematosus susceptibility 21
D1Mit206	1	173004198 to 173004325	127		DNA segment	DNA segment, Chr 1, Massachusetts Institute of Technology 206
Cd8mts1	1	173004198 to 173004325	127		QTL	CD8 T memory cell subset 1
Bglu3	1	173004198 to 173004325	127		QTL	blood glucose level 3
Pbw1	1	173004198 to 173004325	127		QTL	pentobarbital withdrawal QTL 1
Cplaq13	1	173004198 to 181573094	8568896		QTL	circadian period of locomotor activity 13
D1Sta4	1	173033873 to 173034021	148		DNA segment	DNA segment, Chr 1, Philip Stanier 4
Gm42472	1	173052832 to 173053690	858	-	pseudogene	predicted gene 42472