Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:172584695-172684970

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slamf8 1 172581758 to 172590568 8810 - protein coding gene SLAM family member 8
Tssr15235 1 172588233 to 172588246 13 - TSS region transcription start site region 15235
Tssr15236 1 172588569 to 172588613 44 - TSS region transcription start site region 15236
Tssr10242 1 172588707 to 172588716 9 + TSS region transcription start site region 10242
Tssr10243 1 172588721 to 172588737 16 + TSS region transcription start site region 10243
Cpgi1059 1 172588786 to 172588947 161 CpG island CpG island 1059
Tssr10244 1 172588975 to 172588979 4 + TSS region transcription start site region 10244
Tssr15237 1 172590463 to 172590475 12 - TSS region transcription start site region 15237
Tssr15238 1 172590477 to 172590489 12 - TSS region transcription start site region 15238
Tssr15239 1 172590491 to 172590581 90 - TSS region transcription start site region 15239
Tssr15240 1 172590588 to 172590606 18 - TSS region transcription start site region 15240
Tssr15241 1 172590622 to 172590645 23 - TSS region transcription start site region 15241
Tssr15242 1 172590650 to 172590666 16 - TSS region transcription start site region 15242
Tssr15243 1 172590667 to 172590679 12 - TSS region transcription start site region 15243
Fcrl6 1 172596642 to 172602551 5909 - protein coding gene Fc receptor-like 6
Tssr15244 1 172602519 to 172602544 25 - TSS region transcription start site region 15244
Tssr15245 1 172602555 to 172602566 11 - TSS region transcription start site region 15245
Tssr15246 1 172602583 to 172602590 7 - TSS region transcription start site region 15246
32.MMHAP50FRC11.seq 1 172602670 to 172602843 173 DNA segment DNA segment, 32.MMHAP50FRC11.seq
Dusp23 1 172630764 to 172632962 2198 - protein coding gene dual specificity phosphatase 23
Cpgi1060 1 172632526 to 172633194 668 CpG island CpG island 1060
Tssr15247 1 172632791 to 172632809 18 - TSS region transcription start site region 15247
Tssr15248 1 172632815 to 172632869 54 - TSS region transcription start site region 15248
Tssr15249 1 172632931 to 172632943 12 - TSS region transcription start site region 15249
Tssr10245 1 172633064 to 172633075 11 + TSS region transcription start site region 10245
Gm35601 1 172633081 to 172658377 25296 + lncRNA gene predicted gene, 35601
Cpgi1061 1 172634695 to 172634970 275 CpG island CpG island 1061
Gm2710 1 172669034 to 172669636 602 - pseudogene predicted gene 2710
Gm22383 1 172684515 to 172684841 326 - unclassified non-coding RNA gene predicted gene, 22383