Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:172506130-172560870

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tagln2 1 172500246 to 172507375 7129 + protein coding gene transgelin 2
Tssr10223 1 172506226 to 172506267 41 + TSS region transcription start site region 10223
Tssr10224 1 172506572 to 172506584 12 + TSS region transcription start site region 10224
Tssr10225 1 172506611 to 172506623 12 + TSS region transcription start site region 10225
Tssr10226 1 172506624 to 172506642 18 + TSS region transcription start site region 10226
Tssr10227 1 172506665 to 172506704 39 + TSS region transcription start site region 10227
Tssr10228 1 172506717 to 172506735 18 + TSS region transcription start site region 10228
Tssr10229 1 172506767 to 172506785 18 + TSS region transcription start site region 10229
Tssr10230 1 172506788 to 172506850 62 + TSS region transcription start site region 10230
Tssr10231 1 172506851 to 172506860 9 + TSS region transcription start site region 10231
Tssr15226 1 172506852 to 172506896 44 - TSS region transcription start site region 15226
Tssr10232 1 172506895 to 172506924 29 + TSS region transcription start site region 10232
Tssr10233 1 172506926 to 172506959 33 + TSS region transcription start site region 10233
Tssr15227 1 172506945 to 172506986 41 - TSS region transcription start site region 15227
Tssr10234 1 172506985 to 172506997 12 + TSS region transcription start site region 10234
Tssr10235 1 172513245 to 172513257 12 + TSS region transcription start site region 10235
Gm37125 1 172513249 to 172514807 1558 + lncRNA gene predicted gene, 37125
Tssr15228 1 172513933 to 172513980 47 - TSS region transcription start site region 15228
Tssr302 1 172513999 to 172514012 13 - TSS region transcription start site region 302
Tssr10236 1 172514121 to 172514147 26 + TSS region transcription start site region 10236
Cpgi1054 1 172520963 to 172521301 338 CpG island CpG island 1054
Tssr10237 1 172521106 to 172521150 44 + TSS region transcription start site region 10237
Cfap45 1 172521130 to 172545870 24740 + protein coding gene cilia and flagella associated protein 45
Tssr15229 1 172522671 to 172522682 11 - TSS region transcription start site region 15229
Tssr15230 1 172526374 to 172526382 8 - TSS region transcription start site region 15230
Cpgi1055 1 172526746 to 172527016 270 CpG island CpG island 1055
Tssr15231 1 172526832 to 172526834 2 - TSS region transcription start site region 15231
Cpgi1056 1 172532445 to 172532849 404 CpG island CpG island 1056
4933439K11Rik 1 172541620 to 172550806 9186 - lncRNA gene RIKEN cDNA 4933439K11 gene
Cpgi1057 1 172544961 to 172545418 457 CpG island CpG island 1057
Tssr10238 1 172548730 to 172548763 33 + TSS region transcription start site region 10238
Tssr15232 1 172550652 to 172550717 65 - TSS region transcription start site region 15232
Tssr10239 1 172550744 to 172550769 25 + TSS region transcription start site region 10239
Tssr10240 1 172555932 to 172555942 10 + TSS region transcription start site region 10240
Vsig8 1 172555938 to 172563717 7779 + protein coding gene V-set and immunoglobulin domain containing 8
Tssr15233 1 172558123 to 172558142 19 - TSS region transcription start site region 15233
Tssr15234 1 172558147 to 172558162 15 - TSS region transcription start site region 15234
D1Mit456 1 172559415 to 172559524 109 DNA segment DNA Segment, Chr 1, Massachusetts Institute of Technology 456