Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:172380949-172480956

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15 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pigm 1 172376546 to 172384099 7553 + protein coding gene phosphatidylinositol glycan anchor biosynthesis, class M
Gm37145 1 172388234 to 172390989 2755 - unclassified gene predicted gene, 37145
Cpgi1048 1 172392160 to 172392410 250 CpG island CpG island 1048
Tssr299 1 172428899 to 172428914 15 + TSS region transcription start site region 299
Tssr300 1 172430949 to 172430956 7 + TSS region transcription start site region 300
Tssr10196 1 172431010 to 172431021 11 + TSS region transcription start site region 10196
Tssr10197 1 172435299 to 172435312 13 + TSS region transcription start site region 10197
Cpgi1049 1 172451123 to 172451275 152 CpG island CpG island 1049
Gm7804 1 172474023 to 172474814 791 + pseudogene predicted gene 7804
Tssr15219 1 172475165 to 172475200 35 - TSS region transcription start site region 15219
Slamf9 1 172475358 to 172478575 3217 + protein coding gene SLAM family member 9
Tssr10198 1 172475371 to 172475384 13 + TSS region transcription start site region 10198
Tssr10199 1 172475387 to 172475412 25 + TSS region transcription start site region 10199
Tssr10200 1 172475427 to 172475434 7 + TSS region transcription start site region 10200
Gm35522 1 172479501 to 172481663 2162 - lncRNA gene predicted gene, 35522