Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:172327981-172428000

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Kcnj9 1 172320501 to 172329318 8817 - protein coding gene potassium inwardly-rectifying channel, subfamily J, member 9
Tssr15213 1 172329261 to 172329307 46 - TSS region transcription start site region 15213
Tssr15214 1 172329317 to 172329326 9 - TSS region transcription start site region 15214
Tssr15215 1 172335933 to 172335946 13 - TSS region transcription start site region 15215
Cpgi1044 1 172340755 to 172341502 747 CpG island CpG island 1044
Tssr10183 1 172340907 to 172340935 28 + TSS region transcription start site region 10183
Tssr15216 1 172341030 to 172341045 15 - TSS region transcription start site region 15216
Tssr10184 1 172341197 to 172341217 20 + TSS region transcription start site region 10184
Kcnj10 1 172341210 to 172374085 32875 + protein coding gene potassium inwardly-rectifying channel, subfamily J, member 10
Tssr10185 1 172341304 to 172341322 18 + TSS region transcription start site region 10185
Tssr10186 1 172341326 to 172341349 23 + TSS region transcription start site region 10186
Tssr10187 1 172341353 to 172341370 17 + TSS region transcription start site region 10187
Tssr10188 1 172341419 to 172341425 6 + TSS region transcription start site region 10188
Tssr10189 1 172343178 to 172343198 20 + TSS region transcription start site region 10189
Cpgi1045 1 172368929 to 172369456 527 CpG island CpG island 1045
Cpgi1046 1 172369784 to 172369969 185 CpG island CpG island 1046
Tssr10190 1 172370473 to 172370485 12 + TSS region transcription start site region 10190
Tssr10191 1 172370684 to 172370701 17 + TSS region transcription start site region 10191
Tssr10192 1 172370864 to 172370881 17 + TSS region transcription start site region 10192
2810449G22Rik 1 172374969 to 172376690 1721 unclassified gene RIKEN cDNA 2810449G22 gene
Cpgi1047 1 172376213 to 172377609 1396 CpG island CpG island 1047
Tssr15217 1 172376288 to 172376318 30 - TSS region transcription start site region 15217
Tssr10193 1 172376528 to 172376599 71 + TSS region transcription start site region 10193
Pigm 1 172376546 to 172384099 7553 + protein coding gene phosphatidylinositol glycan anchor biosynthesis, class M
Tssr10194 1 172376600 to 172376624 24 + TSS region transcription start site region 10194
Tssr10195 1 172376907 to 172376933 26 + TSS region transcription start site region 10195
Tssr15218 1 172377981 to 172378000 19 - TSS region transcription start site region 15218
Gm37145 1 172388234 to 172390989 2755 - unclassified gene predicted gene, 37145
Cpgi1048 1 172392160 to 172392410 250 CpG island CpG island 1048