Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Emrq1 | 1 | 1084322 | QTL | emotional reactivity QTL 1 | ||
Igsf8 | 1 | 7476 | + | protein coding gene | immunoglobulin superfamily, member 8 | |
Kcnj9 | 1 | 8817 | - | protein coding gene | potassium inwardly-rectifying channel, subfamily J, member 9 | |
Gm36937 | 1 | 667 | + | antisense lncRNA gene | predicted gene, 36937 | |
Cpgi1043 | 1 | 1411 | CpG island | CpG island 1043 | ||
Tssr15210 | 1 | 7 | - | TSS region | transcription start site region 15210 | |
Tssr15211 | 1 | 10 | - | TSS region | transcription start site region 15211 | |
Tssr15212 | 1 | 7 | - | TSS region | transcription start site region 15212 | |
Tssr15213 | 1 | 46 | - | TSS region | transcription start site region 15213 | |
Tssr15214 | 1 | 9 | - | TSS region | transcription start site region 15214 | |
Tssr15215 | 1 | 13 | - | TSS region | transcription start site region 15215 | |
Cpgi1044 | 1 | 747 | CpG island | CpG island 1044 | ||
Tssr10183 | 1 | 28 | + | TSS region | transcription start site region 10183 | |
Tssr15216 | 1 | 15 | - | TSS region | transcription start site region 15216 | |
Tssr10184 | 1 | 20 | + | TSS region | transcription start site region 10184 | |
Kcnj10 | 1 | 32875 | + | protein coding gene | potassium inwardly-rectifying channel, subfamily J, member 10 | |
Tssr10185 | 1 | 18 | + | TSS region | transcription start site region 10185 | |
Tssr10186 | 1 | 23 | + | TSS region | transcription start site region 10186 | |
Tssr10187 | 1 | 17 | + | TSS region | transcription start site region 10187 | |
Tssr10188 | 1 | 6 | + | TSS region | transcription start site region 10188 | |
Tssr10189 | 1 | 20 | + | TSS region | transcription start site region 10189 | |
Cpgi1045 | 1 | 527 | CpG island | CpG island 1045 | ||
Cpgi1046 | 1 | 185 | CpG island | CpG island 1046 | ||
Tssr10190 | 1 | 12 | + | TSS region | transcription start site region 10190 | |
Tssr10191 | 1 | 17 | + | TSS region | transcription start site region 10191 | |
Tssr10192 | 1 | 17 | + | TSS region | transcription start site region 10192 | |
2810449G22Rik | 1 | 1721 | unclassified gene | RIKEN cDNA 2810449G22 gene | ||
Cpgi1047 | 1 | 1396 | CpG island | CpG island 1047 | ||
Tssr15217 | 1 | 30 | - | TSS region | transcription start site region 15217 | |
Tssr10193 | 1 | 71 | + | TSS region | transcription start site region 10193 | |
Pigm | 1 | 7553 | + | protein coding gene | phosphatidylinositol glycan anchor biosynthesis, class M | |
Tssr10194 | 1 | 24 | + | TSS region | transcription start site region 10194 | |
Tssr10195 | 1 | 26 | + | TSS region | transcription start site region 10195 | |
Tssr15218 | 1 | 19 | - | TSS region | transcription start site region 15218 | |
Gm37145 | 1 | 2755 | - | unclassified gene | predicted gene, 37145 | |
Cpgi1048 | 1 | 250 | CpG island | CpG island 1048 | ||
Tssr299 | 1 | 15 | + | TSS region | transcription start site region 299 | |
Tssr300 | 1 | 7 | + | TSS region | transcription start site region 300 | |
Tssr10196 | 1 | 11 | + | TSS region | transcription start site region 10196 | |
Tssr10197 | 1 | 13 | + | TSS region | transcription start site region 10197 | |
Cpgi1049 | 1 | 152 | CpG island | CpG island 1049 | ||
Gm7804 | 1 | 791 | + | pseudogene | predicted gene 7804 | |
Tssr15219 | 1 | 35 | - | TSS region | transcription start site region 15219 | |
Slamf9 | 1 | 3217 | + | protein coding gene | SLAM family member 9 | |
Tssr10198 | 1 | 13 | + | TSS region | transcription start site region 10198 | |
Tssr10199 | 1 | 25 | + | TSS region | transcription start site region 10199 | |
Tssr10200 | 1 | 7 | + | TSS region | transcription start site region 10200 | |
Gm35522 | 1 | 2162 | - | lncRNA gene | predicted gene, 35522 | |
Cpgi1050 | 1 | 582 | CpG island | CpG island 1050 | ||
Tssr10201 | 1 | 27 | + | TSS region | transcription start site region 10201 | |
Igsf9 | 1 | 17090 | + | protein coding gene | immunoglobulin superfamily, member 9 | |
Tssr10202 | 1 | 19 | + | TSS region | transcription start site region 10202 | |
Tssr10203 | 1 | 5 | + | TSS region | transcription start site region 10203 | |
Tssr15220 | 1 | 8 | - | TSS region | transcription start site region 15220 | |
Tssr15221 | 1 | 13 | - | TSS region | transcription start site region 15221 | |
Tssr10204 | 1 | 19 | + | TSS region | transcription start site region 10204 | |
Tssr301 | 1 | 4 | + | TSS region | transcription start site region 301 | |
Cpgi1051 | 1 | 192 | CpG island | CpG island 1051 | ||
Tssr10205 | 1 | 12 | + | TSS region | transcription start site region 10205 | |
Cpgi1052 | 1 | 372 | CpG island | CpG island 1052 | ||
Tssr15222 | 1 | 9 | - | TSS region | transcription start site region 15222 | |
Tssr10206 | 1 | 20 | + | TSS region | transcription start site region 10206 | |
Tssr10207 | 1 | 11 | + | TSS region | transcription start site region 10207 | |
Tssr10208 | 1 | 25 | + | TSS region | transcription start site region 10208 | |
Tssr10209 | 1 | 16 | + | TSS region | transcription start site region 10209 | |
Tssr10210 | 1 | 31 | + | TSS region | transcription start site region 10210 | |
Tssr10211 | 1 | 11 | + | TSS region | transcription start site region 10211 | |
Cpgi1053 | 1 | 1135 | CpG island | CpG island 1053 | ||
Tssr15223 | 1 | 5 | - | TSS region | transcription start site region 15223 | |
Tssr10212 | 1 | 7 | + | TSS region | transcription start site region 10212 | |
Tagln2 | 1 | 7129 | + | protein coding gene | transgelin 2 | |
Tssr10213 | 1 | 2 | + | TSS region | transcription start site region 10213 | |
Tssr10214 | 1 | 23 | + | TSS region | transcription start site region 10214 | |
Tssr15224 | 1 | 9 | - | TSS region | transcription start site region 15224 | |
Tssr10215 | 1 | 37 | + | TSS region | transcription start site region 10215 | |
Tssr10216 | 1 | 17 | + | TSS region | transcription start site region 10216 | |
Tssr15225 | 1 | 2 | - | TSS region | transcription start site region 15225 | |
Tssr10217 | 1 | 45 | + | TSS region | transcription start site region 10217 | |
Tssr10218 | 1 | 12 | + | TSS region | transcription start site region 10218 | |
Tssr10219 | 1 | 37 | + | TSS region | transcription start site region 10219 | |
Tssr10220 | 1 | 20 | + | TSS region | transcription start site region 10220 | |
Tssr10221 | 1 | 13 | + | TSS region | transcription start site region 10221 | |
Tssr10222 | 1 | 20 | + | TSS region | transcription start site region 10222 | |
Tssr10223 | 1 | 41 | + | TSS region | transcription start site region 10223 | |
Tssr10224 | 1 | 12 | + | TSS region | transcription start site region 10224 | |
Tssr10225 | 1 | 12 | + | TSS region | transcription start site region 10225 | |
Tssr10226 | 1 | 18 | + | TSS region | transcription start site region 10226 | |
Tssr10227 | 1 | 39 | + | TSS region | transcription start site region 10227 | |
Tssr10228 | 1 | 18 | + | TSS region | transcription start site region 10228 | |
Tssr10229 | 1 | 18 | + | TSS region | transcription start site region 10229 | |
Tssr10230 | 1 | 62 | + | TSS region | transcription start site region 10230 | |
Tssr10231 | 1 | 9 | + | TSS region | transcription start site region 10231 | |
Tssr15226 | 1 | 44 | - | TSS region | transcription start site region 15226 | |
Tssr10232 | 1 | 29 | + | TSS region | transcription start site region 10232 | |
Tssr10233 | 1 | 33 | + | TSS region | transcription start site region 10233 | |
Tssr15227 | 1 | 41 | - | TSS region | transcription start site region 15227 | |
Tssr10234 | 1 | 12 | + | TSS region | transcription start site region 10234 | |
Tssr10235 | 1 | 12 | + | TSS region | transcription start site region 10235 | |
Gm37125 | 1 | 1558 | + | lncRNA gene | predicted gene, 37125 | |
Tssr15228 | 1 | 47 | - | TSS region | transcription start site region 15228 | |
Tssr302 | 1 | 13 | - | TSS region | transcription start site region 302 | |
Tssr10236 | 1 | 26 | + | TSS region | transcription start site region 10236 | |
Cpgi1054 | 1 | 338 | CpG island | CpG island 1054 | ||
Tssr10237 | 1 | 44 | + | TSS region | transcription start site region 10237 | |
Cfap45 | 1 | 24740 | + | protein coding gene | cilia and flagella associated protein 45 | |
Tssr15229 | 1 | 11 | - | TSS region | transcription start site region 15229 | |
Tssr15230 | 1 | 8 | - | TSS region | transcription start site region 15230 | |
Cpgi1055 | 1 | 270 | CpG island | CpG island 1055 | ||
Tssr15231 | 1 | 2 | - | TSS region | transcription start site region 15231 | |
Cpgi1056 | 1 | 404 | CpG island | CpG island 1056 | ||
4933439K11Rik | 1 | 9186 | - | lncRNA gene | RIKEN cDNA 4933439K11 gene | |
Cpgi1057 | 1 | 457 | CpG island | CpG island 1057 | ||
Tssr10238 | 1 | 33 | + | TSS region | transcription start site region 10238 | |
Tssr15232 | 1 | 65 | - | TSS region | transcription start site region 15232 | |
Tssr10239 | 1 | 25 | + | TSS region | transcription start site region 10239 | |
Tssr10240 | 1 | 10 | + | TSS region | transcription start site region 10240 | |
Vsig8 | 1 | 7779 | + | protein coding gene | V-set and immunoglobulin domain containing 8 | |
Tssr15233 | 1 | 19 | - | TSS region | transcription start site region 15233 | |
Tssr15234 | 1 | 15 | - | TSS region | transcription start site region 15234 | |
D1Mit456 | 1 | 109 | DNA segment | DNA Segment, Chr 1, Massachusetts Institute of Technology 456 | ||
Cpgi1058 | 1 | 1733 | CpG island | CpG island 1058 | ||
Tssr10241 | 1 | 3 | + | TSS region | transcription start site region 10241 | |
Slamf8 | 1 | 8810 | - | protein coding gene | SLAM family member 8 | |
Tssr15235 | 1 | 13 | - | TSS region | transcription start site region 15235 | |
Tssr15236 | 1 | 44 | - | TSS region | transcription start site region 15236 | |
Tssr10242 | 1 | 9 | + | TSS region | transcription start site region 10242 | |
Tssr10243 | 1 | 16 | + | TSS region | transcription start site region 10243 | |
Cpgi1059 | 1 | 161 | CpG island | CpG island 1059 | ||
Tssr10244 | 1 | 4 | + | TSS region | transcription start site region 10244 | |
Tssr15237 | 1 | 12 | - | TSS region | transcription start site region 15237 | |
Tssr15238 | 1 | 12 | - | TSS region | transcription start site region 15238 | |
Tssr15239 | 1 | 90 | - | TSS region | transcription start site region 15239 | |
Tssr15240 | 1 | 18 | - | TSS region | transcription start site region 15240 | |
Tssr15241 | 1 | 23 | - | TSS region | transcription start site region 15241 | |
Tssr15242 | 1 | 16 | - | TSS region | transcription start site region 15242 | |
Tssr15243 | 1 | 12 | - | TSS region | transcription start site region 15243 | |
Fcrl6 | 1 | 5909 | - | protein coding gene | Fc receptor-like 6 | |
Tssr15244 | 1 | 25 | - | TSS region | transcription start site region 15244 | |
Tssr15245 | 1 | 11 | - | TSS region | transcription start site region 15245 | |
Tssr15246 | 1 | 7 | - | TSS region | transcription start site region 15246 | |
32.MMHAP50FRC11.seq | 1 | 173 | DNA segment | DNA segment, 32.MMHAP50FRC11.seq | ||
Dusp23 | 1 | 2198 | - | protein coding gene | dual specificity phosphatase 23 | |
Cpgi1060 | 1 | 668 | CpG island | CpG island 1060 | ||
Tssr15247 | 1 | 18 | - | TSS region | transcription start site region 15247 | |
Tssr15248 | 1 | 54 | - | TSS region | transcription start site region 15248 | |
Tssr15249 | 1 | 12 | - | TSS region | transcription start site region 15249 | |
Tssr10245 | 1 | 11 | + | TSS region | transcription start site region 10245 | |
Gm35601 | 1 | 25296 | + | lncRNA gene | predicted gene, 35601 | |
Cpgi1061 | 1 | 275 | CpG island | CpG island 1061 | ||
Gm2710 | 1 | 602 | - | pseudogene | predicted gene 2710 | |
Gm22383 | 1 | 326 | - | unclassified non-coding RNA gene | predicted gene, 22383 | |
Tssr10246 | 1 | 17 | + | TSS region | transcription start site region 10246 | |
Crp | 1 | 1910 | + | protein coding gene | C-reactive protein, pentraxin-related | |
Nba9 | 1 | 1910 | QTL | New Zealand Black autoimmunity 9 | ||
Tssr10247 | 1 | 22 | + | TSS region | transcription start site region 10247 | |
Tssr10248 | 1 | 11 | + | TSS region | transcription start site region 10248 | |
D1Mit149.1 | 1 | 160 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 149.1 | ||
Tssr10249 | 1 | 15 | + | TSS region | transcription start site region 10249 | |
Tssr10250 | 1 | 12 | + | TSS region | transcription start site region 10250 | |
Tssr10251 | 1 | 10 | + | TSS region | transcription start site region 10251 | |
Bmd5c | 1 | 101 | QTL | bone mineral density 5c | ||
D1Mit149 | 1 | 101 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 149 | ||
Bmd1b | 1 | 706191 | QTL | bone mineral density 1b | ||
Tssr10252 | 1 | 5 | + | TSS region | transcription start site region 10252 | |
Tssr10253 | 1 | 11 | + | TSS region | transcription start site region 10253 | |
Tssr10254 | 1 | 9 | + | TSS region | transcription start site region 10254 | |
Tssr10255 | 1 | 36 | + | TSS region | transcription start site region 10255 | |
Gm38051 | 1 | 432 | + | pseudogene | predicted gene, 38051 | |
Gm19059 | 1 | 2686 | + | pseudogene | predicted gene, 19059 | |
Gm24817 | 1 | 104 | - | snRNA gene | predicted gene, 24817 | |
Tssr303 | 1 | 1 | - | TSS region | transcription start site region 303 | |
9430083B18Rik | 1 | 862 | + | unclassified gene | RIKEN cDNA 9430083B18 gene | |
Ssta2 | 1 | 148 | QTL | susceptibility to Salmonella typhimurium antigens 2 | ||
D1Mit356 | 1 | 148 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 356 | ||
Cafq1 | 1 | 148 | QTL | caffeine metabolism QTL 1 | ||
Tir8 | 1 | 148 | QTL | trypanosome infection response 8 | ||
Cplaq3 | 1 | 1080 | QTL | circadian period of locomotor activity 3 | ||
Apcs | 1 | 1080 | - | protein coding gene | serum amyloid P-component | |
Tssr15250 | 1 | 17 | - | TSS region | transcription start site region 15250 | |
Tssr15251 | 1 | 5 | - | TSS region | transcription start site region 15251 | |
Tssr304 | 1 | 7 | - | TSS region | transcription start site region 304 | |
Tssr15252 | 1 | 33 | - | TSS region | transcription start site region 15252 | |
Tssr15253 | 1 | 12 | - | TSS region | transcription start site region 15253 | |
Tssr15254 | 1 | 20 | - | TSS region | transcription start site region 15254 | |
Tssr15255 | 1 | 7 | - | TSS region | transcription start site region 15255 | |
Tssr15256 | 1 | 19 | - | TSS region | transcription start site region 15256 | |
Tssr15257 | 1 | 15 | - | TSS region | transcription start site region 15257 | |
Gm35686 | 1 | 30235 | + | lncRNA gene | predicted gene, 35686 | |
Tssr10256 | 1 | 15 | + | TSS region | transcription start site region 10256 | |
Gm26077 | 1 | 122 | - | snoRNA gene | predicted gene, 26077 | |
Olfr16 | 1 | 1049 | + | protein coding gene | olfactory receptor 16 | |
Gm35742 | 1 | 8413 | + | lncRNA gene | predicted gene, 35742 | |
Tssr10257 | 1 | 22 | + | TSS region | transcription start site region 10257 | |
Pbw1 | 1 | 127 | QTL | pentobarbital withdrawal QTL 1 | ||
Cplaq13 | 1 | 8568896 | QTL | circadian period of locomotor activity 13 | ||
D1Mit206 | 1 | 127 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 206 | ||
Bglu3 | 1 | 127 | QTL | blood glucose level 3 | ||
Cd8mts1 | 1 | 127 | QTL | CD8 T memory cell subset 1 | ||
Sle21 | 1 | 127 | QTL | systematic lupus erythematosus susceptibility 21 | ||
D1Sta4 | 1 | 148 | DNA segment | DNA segment, Chr 1, Philip Stanier 4 |