Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:172224190-172324213

31 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Atp1a4	1	172223513 to 172258414	34901	-	protein coding gene	ATPase, Na+/K+ transporting, alpha 4 polypeptide
Gm4816	1	172226239 to 172227300	1061	+	pseudogene	predicted gene 4816
D1Sta3	1	172233177 to 172233247	70		DNA segment	DNA segment, Chr 1, Philip Stanier 3
Tssr15194	1	172234623 to 172234632	9	-	TSS region	transcription start site region 15194
Tssr15195	1	172234635 to 172234655	20	-	TSS region	transcription start site region 15195
Gm37950	1	172237291 to 172238290	999	+	antisense lncRNA gene	predicted gene, 37950
Cpgi1039	1	172244676 to 172245101	425		CpG island	CpG island 1039
Tssr15196	1	172258410 to 172258438	28	-	TSS region	transcription start site region 15196
Tssr15197	1	172258444 to 172258453	9	-	TSS region	transcription start site region 15197
Atp1a2	1	172271709 to 172298064	26355	-	protein coding gene	ATPase, Na+/K+ transporting, alpha 2 polypeptide
Tssr15198	1	172274123 to 172274147	24	-	TSS region	transcription start site region 15198
Tssr15199	1	172274149 to 172274166	17	-	TSS region	transcription start site region 15199
Tssr15200	1	172274190 to 172274213	23	-	TSS region	transcription start site region 15200
Tssr15201	1	172274324 to 172274344	20	-	TSS region	transcription start site region 15201
Tssr15202	1	172274431 to 172274454	23	-	TSS region	transcription start site region 15202
Tssr15203	1	172274722 to 172274731	9	-	TSS region	transcription start site region 15203
Tssr15204	1	172278918 to 172278927	9	-	TSS region	transcription start site region 15204
Gm39704	1	172287892 to 172289294	1402	-	lncRNA gene	predicted gene, 39704
Tssr15205	1	172289387 to 172289398	11	-	TSS region	transcription start site region 15205
Tssr15206	1	172291323 to 172291354	31	-	TSS region	transcription start site region 15206
Tssr15207	1	172293666 to 172293677	11	-	TSS region	transcription start site region 15207
Tssr15208	1	172297989 to 172298008	19	-	TSS region	transcription start site region 15208
Cpgi1040	1	172310046 to 172310212	166		CpG island	CpG island 1040
Cpgi1041	1	172311972 to 172312995	1023		CpG island	CpG island 1041
Igsf8	1	172312367 to 172319843	7476	+	protein coding gene	immunoglobulin superfamily, member 8
Tssr10182	1	172312378 to 172312437	59	+	TSS region	transcription start site region 10182
Tssr15209	1	172313991 to 172314035	44	-	TSS region	transcription start site region 15209
Tssr298	1	172317563 to 172317581	18	+	TSS region	transcription start site region 298
Cpgi1042	1	172318132 to 172318607	475		CpG island	CpG island 1042
Kcnj9	1	172320501 to 172329318	8817	-	protein coding gene	potassium inwardly-rectifying channel, subfamily J, member 9
Gm36937	1	172322994 to 172323661	667	+	antisense lncRNA gene	predicted gene, 36937