Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:172213444-172303453

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Casq1 1 172209894 to 172219868 9974 - protein coding gene calsequestrin 1
Gm17224 1 172213021 to 172213680 659 + antisense lncRNA gene predicted gene 17224
Tssr15181 1 172213945 to 172213961 16 - TSS region transcription start site region 15181
Tssr15182 1 172215040 to 172215045 5 - TSS region transcription start site region 15182
Tssr15183 1 172215981 to 172215989 8 - TSS region transcription start site region 15183
Tssr15184 1 172216826 to 172216839 13 - TSS region transcription start site region 15184
Tssr15185 1 172217935 to 172217948 13 - TSS region transcription start site region 15185
Tssr15186 1 172218315 to 172218324 9 - TSS region transcription start site region 15186
Tssr15187 1 172219462 to 172219498 36 - TSS region transcription start site region 15187
Tssr10180 1 172219483 to 172219497 14 + TSS region transcription start site region 10180
Tssr10181 1 172219516 to 172219528 12 + TSS region transcription start site region 10181
Tssr15188 1 172219527 to 172219532 5 - TSS region transcription start site region 15188
Tssr15189 1 172219583 to 172219589 6 - TSS region transcription start site region 15189
Tssr15190 1 172219832 to 172219876 44 - TSS region transcription start site region 15190
Tssr15191 1 172219890 to 172219901 11 - TSS region transcription start site region 15191
Tssr15192 1 172220024 to 172220102 78 - TSS region transcription start site region 15192
Tssr15193 1 172220464 to 172220471 7 - TSS region transcription start site region 15193
Atp1a4 1 172223513 to 172258414 34901 - protein coding gene ATPase, Na+/K+ transporting, alpha 4 polypeptide
Gm4816 1 172226239 to 172227300 1061 + pseudogene predicted gene 4816
D1Sta3 1 172233177 to 172233247 70 DNA segment DNA segment, Chr 1, Philip Stanier 3
Tssr15194 1 172234623 to 172234632 9 - TSS region transcription start site region 15194
Tssr15195 1 172234635 to 172234655 20 - TSS region transcription start site region 15195
Gm37950 1 172237291 to 172238290 999 + antisense lncRNA gene predicted gene, 37950
Cpgi1039 1 172244676 to 172245101 425 CpG island CpG island 1039
Tssr15196 1 172258410 to 172258438 28 - TSS region transcription start site region 15196
Tssr15197 1 172258444 to 172258453 9 - TSS region transcription start site region 15197
Atp1a2 1 172271709 to 172298064 26355 - protein coding gene ATPase, Na+/K+ transporting, alpha 2 polypeptide
Tssr15198 1 172274123 to 172274147 24 - TSS region transcription start site region 15198
Tssr15199 1 172274149 to 172274166 17 - TSS region transcription start site region 15199
Tssr15200 1 172274190 to 172274213 23 - TSS region transcription start site region 15200
Tssr15201 1 172274324 to 172274344 20 - TSS region transcription start site region 15201
Tssr15202 1 172274431 to 172274454 23 - TSS region transcription start site region 15202
Tssr15203 1 172274722 to 172274731 9 - TSS region transcription start site region 15203
Tssr15204 1 172278918 to 172278927 9 - TSS region transcription start site region 15204
Gm39704 1 172287892 to 172289294 1402 - lncRNA gene predicted gene, 39704
Tssr15205 1 172289387 to 172289398 11 - TSS region transcription start site region 15205
Tssr15206 1 172291323 to 172291354 31 - TSS region transcription start site region 15206
Tssr15207 1 172293666 to 172293677 11 - TSS region transcription start site region 15207
Tssr15208 1 172297989 to 172298008 19 - TSS region transcription start site region 15208