Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 1:172138015-172206393

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36 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Alcw1 1 171040785 to 172138790 1098005 QTL alcohol withdrawal 1
Gm10171 1 172144274 to 172144901 627 - pseudogene predicted gene 10171
Cpgi1037 1 172147837 to 172148905 1068 CpG island CpG island 1037
Tssr15148 1 172147923 to 172147965 42 - TSS region transcription start site region 15148
Dcaf8 1 172148015 to 172196393 48378 + protein coding gene DDB1 and CUL4 associated factor 8
Tssr10170 1 172148037 to 172148048 11 + TSS region transcription start site region 10170
Tssr10171 1 172148058 to 172148094 36 + TSS region transcription start site region 10171
Tssr10172 1 172148098 to 172148103 5 + TSS region transcription start site region 10172
Tssr10173 1 172148110 to 172148176 66 + TSS region transcription start site region 10173
Tssr10174 1 172157532 to 172157534 2 + TSS region transcription start site region 10174
Tssr10175 1 172165523 to 172165532 9 + TSS region transcription start site region 10175
Edlmmq1 1 172175373 to 172175373 0 QTL extensor digitorum longus muscle mass QTL 1
Gmmq1 1 172175373 to 172175373 0 QTL gastrocnemius muscle mass QTL 1
Tammq1 1 172175373 to 172175373 0 QTL tibialis anterior muscle mass QTL 1
8430437O03Rik 1 172184426 to 172185732 1306 lncRNA gene RIKEN cDNA 8430437O03 gene
Pea15a 1 172196728 to 172206804 10076 - protein coding gene phosphoprotein enriched in astrocytes 15A
Tssr15149 1 172197751 to 172197764 13 - TSS region transcription start site region 15149
Tssr15150 1 172197845 to 172197874 29 - TSS region transcription start site region 15150
Tssr15151 1 172197888 to 172197911 23 - TSS region transcription start site region 15151
Tssr15152 1 172198047 to 172198061 14 - TSS region transcription start site region 15152
Tssr15153 1 172198063 to 172198079 16 - TSS region transcription start site region 15153
Tssr15154 1 172198174 to 172198202 28 - TSS region transcription start site region 15154
Tssr10176 1 172198219 to 172198236 17 + TSS region transcription start site region 10176
Tssr15155 1 172198333 to 172198343 10 - TSS region transcription start site region 15155
Tssr15156 1 172198505 to 172198516 11 - TSS region transcription start site region 15156
Tssr15157 1 172198541 to 172198559 18 - TSS region transcription start site region 15157
Tssr10177 1 172198607 to 172198625 18 + TSS region transcription start site region 10177
Tssr10178 1 172198654 to 172198671 17 + TSS region transcription start site region 10178
Tssr15158 1 172199142 to 172199168 26 - TSS region transcription start site region 15158
Tssr15159 1 172199194 to 172199207 13 - TSS region transcription start site region 15159
Tssr15160 1 172199222 to 172199249 27 - TSS region transcription start site region 15160
Scvln8 1 172200000 to 94200000 -78000000 QTL sacral vertebrae length 2, 10 week
Tssr15161 1 172200484 to 172200502 18 - TSS region transcription start site region 15161
Tssr15162 1 172200541 to 172200555 14 - TSS region transcription start site region 15162
Tssr15163 1 172200557 to 172200589 32 - TSS region transcription start site region 15163
Cpgi1038 1 172206208 to 172206953 745 CpG island CpG island 1038