Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:171977251-172077268

26 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Vangl2	1	172000960 to 172027314	26354	-	protein coding gene	VANGL planar cell polarity 2
Tssr15127	1	172004090 to 172004104	14	-	TSS region	transcription start site region 15127
Tssr15128	1	172004138 to 172004149	11	-	TSS region	transcription start site region 15128
Tssr15129	1	172004270 to 172004311	41	-	TSS region	transcription start site region 15129
Tssr15130	1	172004451 to 172004458	7	-	TSS region	transcription start site region 15130
Tssr15131	1	172004528 to 172004535	7	-	TSS region	transcription start site region 15131
Tssr15132	1	172004540 to 172004553	13	-	TSS region	transcription start site region 15132
Cpgi1031	1	172009465 to 172010071	606		CpG island	CpG island 1031
Cpgi1032	1	172012999 to 172013169	170		CpG island	CpG island 1032
Cpgi1033	1	172026481 to 172027568	1087		CpG island	CpG island 1033
Tssr10157	1	172026857 to 172026866	9	+	TSS region	transcription start site region 10157
Tssr15133	1	172027251 to 172027268	17	-	TSS region	transcription start site region 15133
Tssr15134	1	172027269 to 172027313	44	-	TSS region	transcription start site region 15134
Tssr15135	1	172028964 to 172028975	11	-	TSS region	transcription start site region 15135
Nhlh1	1	172052292 to 172057573	5281	-	protein coding gene	nescient helix loop helix 1
Tssr15136	1	172052657 to 172052698	41	-	TSS region	transcription start site region 15136
Cpgi1034	1	172053778 to 172054342	564		CpG island	CpG island 1034
Tssr15137	1	172057589 to 172057598	9	-	TSS region	transcription start site region 15137
Ncstn	1	172066013 to 172082749	16736	-	protein coding gene	nicastrin
Tssr15138	1	172066492 to 172066535	43	-	TSS region	transcription start site region 15138
Tssr15139	1	172066550 to 172066566	16	-	TSS region	transcription start site region 15139
Tssr15140	1	172066597 to 172066615	18	-	TSS region	transcription start site region 15140
Tssr15141	1	172066768 to 172066783	15	-	TSS region	transcription start site region 15141
Tssr15142	1	172067442 to 172067463	21	-	TSS region	transcription start site region 15142
Tssr15143	1	172067834 to 172067858	24	-	TSS region	transcription start site region 15143
Tssr15144	1	172068767 to 172068772	5	-	TSS region	transcription start site region 15144