Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:171468122-171585294

26 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
B930036N10Rik	1	171500568 to 171504111	3543	-	antisense lncRNA gene	RIKEN cDNA B930036N10 gene
Gm24871	1	171503048 to 171503163	115	-	snRNA gene	predicted gene, 24871
Cpgi1029	1	171503323 to 171504355	1032		CpG island	CpG island 1029
Tssr10060	1	171503410 to 171503456	46	+	TSS region	transcription start site region 10060
Alyref2	1	171503478 to 171504750	1272	+	protein coding gene	Aly/REF export factor 2
Tssr10061	1	171503625 to 171503649	24	+	TSS region	transcription start site region 10061
Gm9765	1	171515233 to 171516922	1689	+	pseudogene	predicted gene 9765
Itln1	1	171518122 to 171535294	17172	-	protein coding gene	intelectin 1 (galactofuranose binding)
Tssr15046	1	171531131 to 171531148	17	-	TSS region	transcription start site region 15046
Tssr15047	1	171531660 to 171531688	28	-	TSS region	transcription start site region 15047
Tssr15048	1	171535284 to 171535300	16	-	TSS region	transcription start site region 15048
Gm37450	1	171541692 to 171541861	169	+	pseudogene	predicted gene, 37450
Gm35200	1	171553526 to 171557051	3525	-	lncRNA gene	predicted gene, 35200
Gm39703	1	171557872 to 171562126	4254	-	lncRNA gene	predicted gene, 39703
Cd244a	1	171558713 to 171585316	26603	+	protein coding gene	CD244 molecule A
Tssr10062	1	171558912 to 171558930	18	+	TSS region	transcription start site region 10062
Tssr10063	1	171559096 to 171559120	24	+	TSS region	transcription start site region 10063
Tssr10064	1	171559132 to 171559150	18	+	TSS region	transcription start site region 10064
Tssr10065	1	171559160 to 171559181	21	+	TSS region	transcription start site region 10065
Tssr10066	1	171559186 to 171559205	19	+	TSS region	transcription start site region 10066
Tssr10067	1	171559217 to 171559234	17	+	TSS region	transcription start site region 10067
Tssr10068	1	171559243 to 171559274	31	+	TSS region	transcription start site region 10068
Tssr10069	1	171559298 to 171559305	7	+	TSS region	transcription start site region 10069
Tssr15049	1	171562033 to 171562075	42	-	TSS region	transcription start site region 15049
Tssr10070	1	171580531 to 171580533	2	+	TSS region	transcription start site region 10070
Obq25	1	171582944 to 171582944	0		QTL	obesity QTL 25