Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:171338449-171380798

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dedd 1 171329145 to 171342331 13186 + protein coding gene death effector domain-containing
Nit1 1 171342235 to 171345645 3410 - protein coding gene nitrilase 1
Tssr15037 1 171344404 to 171344449 45 - TSS region transcription start site region 15037
Tssr10019 1 171344946 to 171344965 19 + TSS region transcription start site region 10019
Tssr15038 1 171345400 to 171345443 43 - TSS region transcription start site region 15038
Cpgi1024 1 171345401 to 171346510 1109 CpG island CpG island 1024
Pfdn2 1 171345554 to 171358170 12616 + protein coding gene prefoldin 2
Tssr15039 1 171345600 to 171345628 28 - TSS region transcription start site region 15039
Tssr15040 1 171345631 to 171345653 22 - TSS region transcription start site region 15040
Tssr10020 1 171345669 to 171345680 11 + TSS region transcription start site region 10020
Tssr10021 1 171345684 to 171345708 24 + TSS region transcription start site region 10021
Gm37154 1 171354126 to 171355415 1289 + unclassified gene predicted gene, 37154
Tssr10022 1 171356562 to 171356574 12 + TSS region transcription start site region 10022
Tssr10023 1 171358055 to 171358091 36 + TSS region transcription start site region 10023
Klhdc9 1 171358449 to 171360798 2349 - protein coding gene kelch domain containing 9
Cpgi1025 1 171360110 to 171361096 986 CpG island CpG island 1025
Tssr15041 1 171360726 to 171360765 39 - TSS region transcription start site region 15041
Gm37097 1 171362862 to 171363197 335 + pseudogene predicted gene, 37097
Tssr10024 1 171370052 to 171370091 39 + TSS region transcription start site region 10024
Tssr10025 1 171370092 to 171370111 19 + TSS region transcription start site region 10025
Tssr10026 1 171370113 to 171370130 17 + TSS region transcription start site region 10026
Tssr10027 1 171370160 to 171370171 11 + TSS region transcription start site region 10027
Nectin4 1 171370173 to 171388287 18114 + protein coding gene nectin cell adhesion molecule 4
Tssr10028 1 171370345 to 171370359 14 + TSS region transcription start site region 10028
Tssr10029 1 171370385 to 171370408 23 + TSS region transcription start site region 10029
Cpgi1026 1 171380023 to 171380555 532 CpG island CpG island 1026
Tssr10030 1 171380144 to 171380166 22 + TSS region transcription start site region 10030