Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:171290631-171400653

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62 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ufc1 1 171288564 to 171294982 6418 - protein coding gene ubiquitin-fold modifier conjugating enzyme 1
Cpgi1022 1 171294485 to 171294882 397 CpG island CpG island 1022
Tssr15031 1 171294752 to 171294787 35 - TSS region transcription start site region 15031
Tssr15032 1 171294824 to 171294839 15 - TSS region transcription start site region 15032
Tssr15033 1 171294937 to 171295011 74 - TSS region transcription start site region 15033
Rpl27-ps1 1 171305087 to 171305494 407 - pseudogene ribosomal protein L27, pseudogene 1
Gm25151 1 171308047 to 171308137 90 + snoRNA gene predicted gene, 25151
Tssr10010 1 171315317 to 171315323 6 + TSS region transcription start site region 10010
Gm20045 1 171320601 to 171326177 5576 - lincRNA gene predicted gene, 20045
Cpgi1023 1 171328726 to 171330147 1421 CpG island CpG island 1023
Tssr15034 1 171328923 to 171328951 28 - TSS region transcription start site region 15034
Tssr10011 1 171329015 to 171329027 12 + TSS region transcription start site region 10011
Dedd 1 171329145 to 171342331 13186 + protein coding gene death effector domain-containing
Tssr10012 1 171329376 to 171329404 28 + TSS region transcription start site region 10012
Tssr10013 1 171329448 to 171329501 53 + TSS region transcription start site region 10013
Tssr15035 1 171329509 to 171329537 28 - TSS region transcription start site region 15035
Tssr10014 1 171329623 to 171329653 30 + TSS region transcription start site region 10014
Tssr15036 1 171330296 to 171330302 6 - TSS region transcription start site region 15036
Tssr10015 1 171331122 to 171331129 7 + TSS region transcription start site region 10015
Tssr10016 1 171331340 to 171331358 18 + TSS region transcription start site region 10016
Tssr10017 1 171331362 to 171331374 12 + TSS region transcription start site region 10017
Tssr10018 1 171331414 to 171331418 4 + TSS region transcription start site region 10018
Nit1 1 171342235 to 171345645 3410 - protein coding gene nitrilase 1
Tssr15037 1 171344404 to 171344449 45 - TSS region transcription start site region 15037
Tssr10019 1 171344946 to 171344965 19 + TSS region transcription start site region 10019
Tssr15038 1 171345400 to 171345443 43 - TSS region transcription start site region 15038
Cpgi1024 1 171345401 to 171346510 1109 CpG island CpG island 1024
Pfdn2 1 171345554 to 171358170 12616 + protein coding gene prefoldin 2
Tssr15039 1 171345600 to 171345628 28 - TSS region transcription start site region 15039
Tssr15040 1 171345631 to 171345653 22 - TSS region transcription start site region 15040
Tssr10020 1 171345669 to 171345680 11 + TSS region transcription start site region 10020
Tssr10021 1 171345684 to 171345708 24 + TSS region transcription start site region 10021
Gm37154 1 171354126 to 171355415 1289 + unclassified gene predicted gene, 37154
Tssr10022 1 171356562 to 171356574 12 + TSS region transcription start site region 10022
Tssr10023 1 171358055 to 171358091 36 + TSS region transcription start site region 10023
Klhdc9 1 171358449 to 171360798 2349 - protein coding gene kelch domain containing 9
Cpgi1025 1 171360110 to 171361096 986 CpG island CpG island 1025
Tssr15041 1 171360726 to 171360765 39 - TSS region transcription start site region 15041
Gm37097 1 171362862 to 171363197 335 + pseudogene predicted gene, 37097
Tssr10024 1 171370052 to 171370091 39 + TSS region transcription start site region 10024
Tssr10025 1 171370092 to 171370111 19 + TSS region transcription start site region 10025
Tssr10026 1 171370113 to 171370130 17 + TSS region transcription start site region 10026
Tssr10027 1 171370160 to 171370171 11 + TSS region transcription start site region 10027
Nectin4 1 171370173 to 171388287 18114 + protein coding gene nectin cell adhesion molecule 4
Tssr10028 1 171370345 to 171370359 14 + TSS region transcription start site region 10028
Tssr10029 1 171370385 to 171370408 23 + TSS region transcription start site region 10029
Cpgi1026 1 171380023 to 171380555 532 CpG island CpG island 1026
Tssr10030 1 171380144 to 171380166 22 + TSS region transcription start site region 10030
Tssr10031 1 171383514 to 171383520 6 + TSS region transcription start site region 10031
Tssr15042 1 171388754 to 171388763 9 - TSS region transcription start site region 15042
Tssr15043 1 171388772 to 171388798 26 - TSS region transcription start site region 15043
Tssr10032 1 171388920 to 171388935 15 + TSS region transcription start site region 10032
Tssr10033 1 171388955 to 171389042 87 + TSS region transcription start site region 10033
Arhgap30 1 171388960 to 171410240 21280 + protein coding gene Rho GTPase activating protein 30
Tssr10034 1 171389068 to 171389099 31 + TSS region transcription start site region 10034
Tssr10035 1 171389100 to 171389115 15 + TSS region transcription start site region 10035
Tssr10036 1 171389130 to 171389137 7 + TSS region transcription start site region 10036
Tssr10037 1 171389146 to 171389157 11 + TSS region transcription start site region 10037
Tssr10038 1 171389181 to 171389197 16 + TSS region transcription start site region 10038
Tssr10039 1 171389211 to 171389233 22 + TSS region transcription start site region 10039
Tssr10040 1 171389240 to 171389247 7 + TSS region transcription start site region 10040
Tssr15044 1 171390178 to 171390205 27 - TSS region transcription start site region 15044