Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:171280087-171330494

31 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Ppox	1	171276991 to 171281192	4201	-	protein coding gene	protoporphyrinogen oxidase
Cpgi1020	1	171280784 to 171281702	918		CpG island	CpG island 1020
Tssr15025	1	171280918 to 171280955	37	-	TSS region	transcription start site region 15025
Tssr15026	1	171280975 to 171280994	19	-	TSS region	transcription start site region 15026
Tssr15027	1	171281113 to 171281152	39	-	TSS region	transcription start site region 15027
Tssr15028	1	171281181 to 171281192	11	-	TSS region	transcription start site region 15028
Tssr10007	1	171281307 to 171281319	12	+	TSS region	transcription start site region 10007
Usp21	1	171281949 to 171287961	6012	-	protein coding gene	ubiquitin specific peptidase 21
Cpgi1021	1	171287390 to 171288201	811		CpG island	CpG island 1021
Tssr15029	1	171287916 to 171287929	13	-	TSS region	transcription start site region 15029
Tssr15030	1	171287931 to 171287976	45	-	TSS region	transcription start site region 15030
Tssr10008	1	171288041 to 171288050	9	+	TSS region	transcription start site region 10008
Tssr10009	1	171288070 to 171288081	11	+	TSS region	transcription start site region 10009
Ufc1	1	171288564 to 171294982	6418	-	protein coding gene	ubiquitin-fold modifier conjugating enzyme 1
Cpgi1022	1	171294485 to 171294882	397		CpG island	CpG island 1022
Tssr15031	1	171294752 to 171294787	35	-	TSS region	transcription start site region 15031
Tssr15032	1	171294824 to 171294839	15	-	TSS region	transcription start site region 15032
Tssr15033	1	171294937 to 171295011	74	-	TSS region	transcription start site region 15033
Rpl27-ps1	1	171305087 to 171305494	407	-	pseudogene	ribosomal protein L27, pseudogene 1
Gm25151	1	171308047 to 171308137	90	+	snoRNA gene	predicted gene, 25151
Tssr10010	1	171315317 to 171315323	6	+	TSS region	transcription start site region 10010
Gm20045	1	171320601 to 171326177	5576	-	lincRNA gene	predicted gene, 20045
Cpgi1023	1	171328726 to 171330147	1421		CpG island	CpG island 1023
Tssr15034	1	171328923 to 171328951	28	-	TSS region	transcription start site region 15034
Tssr10011	1	171329015 to 171329027	12	+	TSS region	transcription start site region 10011
Dedd	1	171329145 to 171342331	13186	+	protein coding gene	death effector domain-containing
Tssr10012	1	171329376 to 171329404	28	+	TSS region	transcription start site region 10012
Tssr10013	1	171329448 to 171329501	53	+	TSS region	transcription start site region 10013
Tssr15035	1	171329509 to 171329537	28	-	TSS region	transcription start site region 15035
Tssr10014	1	171329623 to 171329653	30	+	TSS region	transcription start site region 10014
Tssr15036	1	171330296 to 171330302	6	-	TSS region	transcription start site region 15036