Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:171230555-171270557

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fcer1g 1 171229572 to 171234349 4777 - protein coding gene Fc receptor, IgE, high affinity I, gamma polypeptide
Tssr15007 1 171231015 to 171231056 41 - TSS region transcription start site region 15007
Tssr9998 1 171231166 to 171231195 29 + TSS region transcription start site region 9998
Tssr15008 1 171231199 to 171231219 20 - TSS region transcription start site region 15008
Tssr15009 1 171231223 to 171231233 10 - TSS region transcription start site region 15009
Tssr15010 1 171231245 to 171231264 19 - TSS region transcription start site region 15010
Tssr15011 1 171231929 to 171231950 21 - TSS region transcription start site region 15011
Tssr9999 1 171232127 to 171232160 33 + TSS region transcription start site region 9999
Cpgi1015 1 171234213 to 171234395 182 CpG island CpG island 1015
Tssr15012 1 171234276 to 171234287 11 - TSS region transcription start site region 15012
Tssr15013 1 171234290 to 171234324 34 - TSS region transcription start site region 15013
Tssr15014 1 171234333 to 171234344 11 - TSS region transcription start site region 15014
Tssr15015 1 171234485 to 171234501 16 - TSS region transcription start site region 15015
Tssr15016 1 171234607 to 171234620 13 - TSS region transcription start site region 15016
Tssr15017 1 171234642 to 171234650 8 - TSS region transcription start site region 15017
Tssr15018 1 171234698 to 171234729 31 - TSS region transcription start site region 15018
Ndufs2 1 171234853 to 171247122 12269 - protein coding gene NADH:ubiquinone oxidoreductase core subunit S2
Tssr15019 1 171237598 to 171237606 8 - TSS region transcription start site region 15019
Tssr15020 1 171237607 to 171237624 17 - TSS region transcription start site region 15020
Tssr15021 1 171240107 to 171240116 9 - TSS region transcription start site region 15021
Bllact1 1 171241019 to 171241019 0 QTL base line locomotor activity 1
Tssr15022 1 171241045 to 171241059 14 - TSS region transcription start site region 15022
Cpgi1016 1 171246884 to 171247520 636 CpG island CpG island 1016
Tssr15023 1 171247096 to 171247121 25 - TSS region transcription start site region 15023
Tssr10000 1 171247352 to 171247377 25 + TSS region transcription start site region 10000
Tssr10001 1 171250416 to 171250433 17 + TSS region transcription start site region 10001
Adamts4 1 171250422 to 171259922 9500 + protein coding gene a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 4
Tssr10002 1 171250555 to 171250557 2 + TSS region transcription start site region 10002
Tssr15024 1 171251664 to 171251675 11 - TSS region transcription start site region 15024
Cpgi1017 1 171256589 to 171256766 177 CpG island CpG island 1017
Cpgi1018 1 171258845 to 171259050 205 CpG island CpG island 1018
Tssr10003 1 171266725 to 171266731 6 + TSS region transcription start site region 10003
Cpgi1019 1 171270130 to 171270912 782 CpG island CpG island 1019
Tssr10004 1 171270321 to 171270360 39 + TSS region transcription start site region 10004
B4galt3 1 171270328 to 171276895 6567 + protein coding gene UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 3
Tssr10005 1 171270375 to 171270386 11 + TSS region transcription start site region 10005