Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:171058614-171098784

29 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Del(1Fcgr2b-Fcgr3)1Rav	1	170960558 to 171064935	104377		chromosomal deletion	deletion, Chr 1, Jeffrey V Ravetch 1
Del(1Fcgr2b-Fcgr3)1Vlcg	1	170960558 to 171064935	104377		chromosomal deletion	deletion, Chr1, Regeneron Pharmaceuticals
Fcgr3	1	171051174 to 171064935	13761	-	protein coding gene	Fc receptor, IgG, low affinity III
Tssr14974	1	171058605 to 171058637	32	-	TSS region	transcription start site region 14974
Tssr14975	1	171059348 to 171059379	31	-	TSS region	transcription start site region 14975
Tssr14976	1	171059390 to 171059405	15	-	TSS region	transcription start site region 14976
Tssr14977	1	171059589 to 171059595	6	-	TSS region	transcription start site region 14977
Cpgi1005	1	171063753 to 171064053	300		CpG island	CpG island 1005
n-TEctc5	1	171064164 to 171064235	71	-	tRNA gene	nuclear encoded tRNA glutamic acid 5 (anticodon CTC)
Mir6546	1	171064591 to 171064652	61	-	miRNA gene	microRNA 6546
n-TGtcc1	1	171064699 to 171064770	71	-	tRNA gene	nuclear encoded tRNA glycine 1 (anticodon TCC)
n-TDgtc3	1	171065358 to 171065429	71	-	tRNA gene	nuclear encoded tRNA aspartic acid 3 (anticodon GTC)
n-TLcag6	1	171065984 to 171066066	82	+	tRNA gene	nuclear encoded tRNA leucine 6 (anticodon CAG)
n-TGgcc12	1	171066631 to 171066701	70	+	tRNA gene	nuclear encoded tRNA glycine 12 (anticodon GCC)
n-TEctc8	1	171071792 to 171071863	71	-	tRNA gene	nuclear encoded tRNA glutamic acid 8 (anticodon CTC)
Gm27552	1	171072226 to 171072287	61	-	miRNA gene	predicted gene, 27552
n-TGtcc5	1	171072334 to 171072405	71	-	tRNA gene	nuclear encoded tRNA glycine 5 (anticodon TCC)
n-TDgtc7	1	171072993 to 171073064	71	-	tRNA gene	nuclear encoded tRNA aspartic acid 7 (anticodon GTC)
n-TLcag7	1	171073619 to 171073701	82	+	tRNA gene	nuclear encoded tRNA leucine 7 (anticodon CAG)
n-TGgcc13	1	171074302 to 171074372	70	+	tRNA gene	nuclear encoded tRNA glycine 13 (anticodon GCC)
Cpgi1006	1	171078614 to 171078784	170		CpG island	CpG island 1006
n-TEctc7	1	171079406 to 171079477	71	-	tRNA gene	nuclear encoded tRNA glutamic acid 7 (anticodon CTC)
Gm27844	1	171079840 to 171079901	61	-	miRNA gene	predicted gene, 27844
n-TGtcc4	1	171079948 to 171080019	71	-	tRNA gene	nuclear encoded tRNA glycine 4 (anticodon TCC)
n-TDgtc6	1	171080607 to 171080678	71	-	tRNA gene	nuclear encoded tRNA aspartic acid 6 (anticodon GTC)
n-TLcag8	1	171081233 to 171081315	82	+	tRNA gene	nuclear encoded tRNA leucine 8 (anticodon CAG)
n-TGgcc14	1	171081876 to 171081946	70	+	tRNA gene	nuclear encoded tRNA glycine 14 (anticodon GCC)
Cpgi1007	1	171085741 to 171086115	374		CpG island	CpG island 1007
Tssr14978	1	171089980 to 171089989	9	-	TSS region	transcription start site region 14978