Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:171046174-171069935

24 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Del(1Fcgr2b-Fcgr3)1Rav	1	170960558 to 171064935	104377		chromosomal deletion	deletion, Chr 1, Jeffrey V Ravetch 1
Del(1Fcgr2b-Fcgr3)1Vlcg	1	170960558 to 171064935	104377		chromosomal deletion	deletion, Chr1, Regeneron Pharmaceuticals
Qrr1	1	171051174 to 175492500	4441326		QTL	QTL rich region on chromosome 1
Fcgr3	1	171051174 to 171064935	13761	-	protein coding gene	Fc receptor, IgG, low affinity III
Szs1	1	171051174 to 174628870	3577696		QTL	seizure susceptibility 1
Tssr9960	1	171051188 to 171051201	13	+	TSS region	transcription start site region 9960
Tssr9961	1	171051246 to 171051267	21	+	TSS region	transcription start site region 9961
Tssr14968	1	171051821 to 171051864	43	-	TSS region	transcription start site region 14968
Tssr14969	1	171053979 to 171054011	32	-	TSS region	transcription start site region 14969
Tssr14970	1	171057971 to 171057981	10	-	TSS region	transcription start site region 14970
Tssr14971	1	171058038 to 171058060	22	-	TSS region	transcription start site region 14971
Tssr14972	1	171058078 to 171058079	1	-	TSS region	transcription start site region 14972
Tssr14973	1	171058374 to 171058383	9	-	TSS region	transcription start site region 14973
Tssr14974	1	171058605 to 171058637	32	-	TSS region	transcription start site region 14974
Tssr14975	1	171059348 to 171059379	31	-	TSS region	transcription start site region 14975
Tssr14976	1	171059390 to 171059405	15	-	TSS region	transcription start site region 14976
Tssr14977	1	171059589 to 171059595	6	-	TSS region	transcription start site region 14977
Cpgi1005	1	171063753 to 171064053	300		CpG island	CpG island 1005
n-TEctc5	1	171064164 to 171064235	71	-	tRNA gene	nuclear encoded tRNA glutamic acid 5 (anticodon CTC)
Mir6546	1	171064591 to 171064652	61	-	miRNA gene	microRNA 6546
n-TGtcc1	1	171064699 to 171064770	71	-	tRNA gene	nuclear encoded tRNA glycine 1 (anticodon TCC)
n-TDgtc3	1	171065358 to 171065429	71	-	tRNA gene	nuclear encoded tRNA aspartic acid 3 (anticodon GTC)
n-TLcag6	1	171065984 to 171066066	82	+	tRNA gene	nuclear encoded tRNA leucine 6 (anticodon CAG)
n-TGgcc12	1	171066631 to 171066701	70	+	tRNA gene	nuclear encoded tRNA glycine 12 (anticodon GCC)