Gene symbol |
Chromo- some |
Coordinates (bp, mm10) |
Size (bp) |
Strand |
Feature Type |
Gene name |
---|---|---|---|---|---|---|
Scgq2 | 1 | 24555169 | QTL | spontaneous crescentic glomerulonephritis QTL 2 | ||
Nktcn1 | 1 | 3446015 | QTL | natural killer T cell numbers 1 | ||
Bmd5b | 1 | 2930524 | QTL | bone mineral density 5b | ||
Del(1Fcgr2b-Fcgr3)1Rav | 1 | 104377 | chromosomal deletion | deletion, Chr 1, Jeffrey V Ravetch 1 | ||
Del(1Fcgr2b-Fcgr3)1Vlcg | 1 | 104377 | chromosomal deletion | deletion, Chr1, Regeneron Pharmaceuticals | ||
Gm35090 | 1 | 788 | - | lncRNA gene | predicted gene, 35090 | |
Cpgi1002 | 1 | 552 | CpG island | CpG island 1002 | ||
n-TNgtt6 | 1 | 73 | - | tRNA gene | nuclear encoded tRNA asparagine 6 (anticodon GTT) | |
n-TDgtc4 | 1 | 71 | - | tRNA gene | nuclear encoded tRNA aspartic acid 4 (anticodon GTC) | |
n-TGtcc2 | 1 | 71 | - | tRNA gene | nuclear encoded tRNA glycine 2 (anticodon TCC) | |
Cpgi1003 | 1 | 500 | CpG island | CpG island 1003 | ||
n-TLcag3 | 1 | 82 | + | tRNA gene | nuclear encoded tRNA leucine 3 (anticodon CAG) | |
Alcw1 | 1 | 1098005 | QTL | alcohol withdrawal 1 | ||
Cpgi1004 | 1 | 232 | CpG island | CpG island 1004 | ||
n-TGgcc4 | 1 | 70 | + | tRNA gene | nuclear encoded tRNA glycine 4 (anticodon GCC) | |
Szs1 | 1 | 3577696 | QTL | seizure susceptibility 1 | ||
Qrr1 | 1 | 4441326 | QTL | QTL rich region on chromosome 1 | ||
Fcgr3 | 1 | 13761 | - | protein coding gene | Fc receptor, IgG, low affinity III | |
Tssr9960 | 1 | 13 | + | TSS region | transcription start site region 9960 | |
Tssr9961 | 1 | 21 | + | TSS region | transcription start site region 9961 | |
Tssr14968 | 1 | 43 | - | TSS region | transcription start site region 14968 | |
Tssr14969 | 1 | 32 | - | TSS region | transcription start site region 14969 | |
Tssr14970 | 1 | 10 | - | TSS region | transcription start site region 14970 | |
Tssr14971 | 1 | 22 | - | TSS region | transcription start site region 14971 | |
Tssr14972 | 1 | 1 | - | TSS region | transcription start site region 14972 | |
Tssr14973 | 1 | 9 | - | TSS region | transcription start site region 14973 | |
Tssr14974 | 1 | 32 | - | TSS region | transcription start site region 14974 | |
Tssr14975 | 1 | 31 | - | TSS region | transcription start site region 14975 | |
Tssr14976 | 1 | 15 | - | TSS region | transcription start site region 14976 | |
Tssr14977 | 1 | 6 | - | TSS region | transcription start site region 14977 | |
Cpgi1005 | 1 | 300 | CpG island | CpG island 1005 | ||
n-TEctc5 | 1 | 71 | - | tRNA gene | nuclear encoded tRNA glutamic acid 5 (anticodon CTC) | |
Mir6546 | 1 | 61 | - | miRNA gene | microRNA 6546 | |
n-TGtcc1 | 1 | 71 | - | tRNA gene | nuclear encoded tRNA glycine 1 (anticodon TCC) | |
n-TDgtc3 | 1 | 71 | - | tRNA gene | nuclear encoded tRNA aspartic acid 3 (anticodon GTC) | |
n-TLcag6 | 1 | 82 | + | tRNA gene | nuclear encoded tRNA leucine 6 (anticodon CAG) | |
n-TGgcc12 | 1 | 70 | + | tRNA gene | nuclear encoded tRNA glycine 12 (anticodon GCC) | |
n-TEctc8 | 1 | 71 | - | tRNA gene | nuclear encoded tRNA glutamic acid 8 (anticodon CTC) | |
Gm27552 | 1 | 61 | - | miRNA gene | predicted gene, 27552 | |
n-TGtcc5 | 1 | 71 | - | tRNA gene | nuclear encoded tRNA glycine 5 (anticodon TCC) | |
n-TDgtc7 | 1 | 71 | - | tRNA gene | nuclear encoded tRNA aspartic acid 7 (anticodon GTC) | |
n-TLcag7 | 1 | 82 | + | tRNA gene | nuclear encoded tRNA leucine 7 (anticodon CAG) | |
n-TGgcc13 | 1 | 70 | + | tRNA gene | nuclear encoded tRNA glycine 13 (anticodon GCC) | |
Cpgi1006 | 1 | 170 | CpG island | CpG island 1006 | ||
n-TEctc7 | 1 | 71 | - | tRNA gene | nuclear encoded tRNA glutamic acid 7 (anticodon CTC) | |
Gm27844 | 1 | 61 | - | miRNA gene | predicted gene, 27844 | |
n-TGtcc4 | 1 | 71 | - | tRNA gene | nuclear encoded tRNA glycine 4 (anticodon TCC) | |
n-TDgtc6 | 1 | 71 | - | tRNA gene | nuclear encoded tRNA aspartic acid 6 (anticodon GTC) | |
n-TLcag8 | 1 | 82 | + | tRNA gene | nuclear encoded tRNA leucine 8 (anticodon CAG) | |
n-TGgcc14 | 1 | 70 | + | tRNA gene | nuclear encoded tRNA glycine 14 (anticodon GCC) | |
Cpgi1007 | 1 | 374 | CpG island | CpG island 1007 | ||
Tssr14978 | 1 | 9 | - | TSS region | transcription start site region 14978 | |
Tssr14979 | 1 | 1 | - | TSS region | transcription start site region 14979 | |
Cpgi1008 | 1 | 1051 | CpG island | CpG island 1008 | ||
n-TLcag9 | 1 | 82 | - | tRNA gene | nuclear encoded tRNA leucine 9 (anticodon CAG) | |
n-TDgtc5 | 1 | 71 | + | tRNA gene | nuclear encoded tRNA aspartic acid 5 (anticodon GTC) | |
n-TGtcc3 | 1 | 71 | + | tRNA gene | nuclear encoded tRNA glycine 3 (anticodon TCC) | |
n-TEctc6 | 1 | 71 | + | tRNA gene | nuclear encoded tRNA glutamic acid 6 (anticodon CTC) | |
Cpgi1009 | 1 | 255 | CpG island | CpG island 1009 | ||
n-TVcac6 | 1 | 72 | + | tRNA gene | nuclear encoded tRNA valine 6 (anticodon CAC) | |
Cpgi1010 | 1 | 438 | CpG island | CpG island 1010 | ||
Cfap126 | 1 | 13049 | + | protein coding gene | cilia and flagella associated protein 126 | |
Tssr14980 | 1 | 9 | - | TSS region | transcription start site region 14980 | |
Tssr9962 | 1 | 71 | + | TSS region | transcription start site region 9962 | |
Tssr9963 | 1 | 4 | + | TSS region | transcription start site region 9963 | |
Tssr9964 | 1 | 7 | + | TSS region | transcription start site region 9964 | |
Tssr9965 | 1 | 23 | + | TSS region | transcription start site region 9965 | |
Tssr9966 | 1 | 7 | + | TSS region | transcription start site region 9966 | |
Tssr9967 | 1 | 15 | + | TSS region | transcription start site region 9967 | |
Tssr9968 | 1 | 7 | + | TSS region | transcription start site region 9968 | |
Tssr9969 | 1 | 20 | + | TSS region | transcription start site region 9969 | |
Tssr9970 | 1 | 42 | + | TSS region | transcription start site region 9970 | |
Tssr9971 | 1 | 9 | + | TSS region | transcription start site region 9971 | |
Tssr9972 | 1 | 22 | + | TSS region | transcription start site region 9972 | |
Sdhc | 1 | 21446 | - | protein coding gene | succinate dehydrogenase complex, subunit C, integral membrane protein | |
Tssr14981 | 1 | 25 | - | TSS region | transcription start site region 14981 | |
Tssr14982 | 1 | 40 | - | TSS region | transcription start site region 14982 | |
Gm46172 | 1 | 2010 | - | lncRNA gene | predicted gene, 46172 | |
Tssr14983 | 1 | 12 | - | TSS region | transcription start site region 14983 | |
Tssr14984 | 1 | 12 | - | TSS region | transcription start site region 14984 | |
Cpgi1011 | 1 | 433 | CpG island | CpG island 1011 | ||
Tssr14985 | 1 | 17 | - | TSS region | transcription start site region 14985 | |
Mpz | 1 | 10417 | + | protein coding gene | myelin protein zero | |
Tssr9973 | 1 | 17 | + | TSS region | transcription start site region 9973 | |
Tssr9974 | 1 | 12 | + | TSS region | transcription start site region 9974 | |
Tssr9975 | 1 | 12 | + | TSS region | transcription start site region 9975 | |
Cpgi1012 | 1 | 348 | CpG island | CpG island 1012 | ||
Tssr9976 | 1 | 17 | + | TSS region | transcription start site region 9976 | |
Tssr9977 | 1 | 22 | + | TSS region | transcription start site region 9977 | |
Tssr9978 | 1 | 27 | + | TSS region | transcription start site region 9978 | |
Tssr9979 | 1 | 3 | + | TSS region | transcription start site region 9979 | |
Tssr9980 | 1 | 11 | + | TSS region | transcription start site region 9980 | |
Tssr9981 | 1 | 9 | + | TSS region | transcription start site region 9981 | |
Pcp4l1 | 1 | 23004 | - | protein coding gene | Purkinje cell protein 4-like 1 | |
Tssr14986 | 1 | 4 | - | TSS region | transcription start site region 14986 | |
Tssr14987 | 1 | 11 | - | TSS region | transcription start site region 14987 | |
Tssr9982 | 1 | 23 | + | TSS region | transcription start site region 9982 | |
Cpgi1013 | 1 | 409 | CpG island | CpG island 1013 | ||
Tssr285 | 1 | 11 | - | TSS region | transcription start site region 285 | |
Tssr14988 | 1 | 17 | - | TSS region | transcription start site region 14988 | |
Nr1i3 | 1 | 4913 | + | protein coding gene | nuclear receptor subfamily 1, group I, member 3 | |
Tssr9983 | 1 | 38 | + | TSS region | transcription start site region 9983 | |
Tssr9984 | 1 | 32 | + | TSS region | transcription start site region 9984 | |
Tomm40l | 1 | 4712 | - | protein coding gene | translocase of outer mitochondrial membrane 40-like | |
Tssr286 | 1 | 5 | + | TSS region | transcription start site region 286 | |
Tssr9985 | 1 | 11 | + | TSS region | transcription start site region 9985 | |
Cpgi1014 | 1 | 376 | CpG island | CpG island 1014 | ||
Tssr14989 | 1 | 36 | - | TSS region | transcription start site region 14989 | |
Tssr14990 | 1 | 11 | - | TSS region | transcription start site region 14990 | |
Apoa2 | 1 | 1325 | + | protein coding gene | apolipoprotein A-II | |
Tssr9986 | 1 | 23 | + | TSS region | transcription start site region 9986 | |
Tssr9987 | 1 | 62 | + | TSS region | transcription start site region 9987 | |
Tssr9988 | 1 | 48 | + | TSS region | transcription start site region 9988 | |
Tssr9989 | 1 | 40 | + | TSS region | transcription start site region 9989 | |
Tssr9990 | 1 | 14 | + | TSS region | transcription start site region 9990 | |
Tssr9991 | 1 | 22 | + | TSS region | transcription start site region 9991 | |
Tssr14991 | 1 | 15 | - | TSS region | transcription start site region 14991 | |
Tssr14992 | 1 | 24 | - | TSS region | transcription start site region 14992 | |
Tssr14993 | 1 | 38 | - | TSS region | transcription start site region 14993 | |
Tssr9992 | 1 | 24 | + | TSS region | transcription start site region 9992 | |
Tssr14994 | 1 | 11 | - | TSS region | transcription start site region 14994 | |
Tssr14995 | 1 | 23 | - | TSS region | transcription start site region 14995 | |
Fcer1g | 1 | 4777 | - | protein coding gene | Fc receptor, IgE, high affinity I, gamma polypeptide | |
Tssr9993 | 1 | 11 | + | TSS region | transcription start site region 9993 | |
Tssr9994 | 1 | 14 | + | TSS region | transcription start site region 9994 | |
Tssr14996 | 1 | 12 | - | TSS region | transcription start site region 14996 | |
Tssr9995 | 1 | 63 | + | TSS region | transcription start site region 9995 | |
Tssr14997 | 1 | 9 | - | TSS region | transcription start site region 14997 | |
Tssr287 | 1 | 1 | - | TSS region | transcription start site region 287 | |
Tssr14998 | 1 | 17 | - | TSS region | transcription start site region 14998 | |
Tssr14999 | 1 | 11 | - | TSS region | transcription start site region 14999 | |
Tssr288 | 1 | 14 | - | TSS region | transcription start site region 288 | |
Tssr15000 | 1 | 10 | - | TSS region | transcription start site region 15000 | |
Tssr15001 | 1 | 15 | - | TSS region | transcription start site region 15001 | |
Tssr15002 | 1 | 17 | - | TSS region | transcription start site region 15002 | |
Tssr9996 | 1 | 16 | + | TSS region | transcription start site region 9996 | |
Tssr9997 | 1 | 38 | + | TSS region | transcription start site region 9997 | |
Tssr15003 | 1 | 11 | - | TSS region | transcription start site region 15003 | |
Tssr15004 | 1 | 18 | - | TSS region | transcription start site region 15004 | |
Tssr15005 | 1 | 15 | - | TSS region | transcription start site region 15005 | |
Tssr15006 | 1 | 12 | - | TSS region | transcription start site region 15006 | |
Tssr15007 | 1 | 41 | - | TSS region | transcription start site region 15007 | |
Tssr9998 | 1 | 29 | + | TSS region | transcription start site region 9998 | |
Tssr15008 | 1 | 20 | - | TSS region | transcription start site region 15008 | |
Tssr15009 | 1 | 10 | - | TSS region | transcription start site region 15009 | |
Tssr15010 | 1 | 19 | - | TSS region | transcription start site region 15010 | |
Tssr15011 | 1 | 21 | - | TSS region | transcription start site region 15011 | |
Tssr9999 | 1 | 33 | + | TSS region | transcription start site region 9999 | |
Cpgi1015 | 1 | 182 | CpG island | CpG island 1015 | ||
Tssr15012 | 1 | 11 | - | TSS region | transcription start site region 15012 | |
Tssr15013 | 1 | 34 | - | TSS region | transcription start site region 15013 | |
Tssr15014 | 1 | 11 | - | TSS region | transcription start site region 15014 | |
Tssr15015 | 1 | 16 | - | TSS region | transcription start site region 15015 | |
Tssr15016 | 1 | 13 | - | TSS region | transcription start site region 15016 | |
Tssr15017 | 1 | 8 | - | TSS region | transcription start site region 15017 | |
Tssr15018 | 1 | 31 | - | TSS region | transcription start site region 15018 | |
Ndufs2 | 1 | 12269 | - | protein coding gene | NADH:ubiquinone oxidoreductase core subunit S2 | |
Tssr15019 | 1 | 8 | - | TSS region | transcription start site region 15019 | |
Tssr15020 | 1 | 17 | - | TSS region | transcription start site region 15020 | |
Tssr15021 | 1 | 9 | - | TSS region | transcription start site region 15021 | |
Bllact1 | 1 | 0 | QTL | base line locomotor activity 1 | ||
Tssr15022 | 1 | 14 | - | TSS region | transcription start site region 15022 | |
Cpgi1016 | 1 | 636 | CpG island | CpG island 1016 | ||
Tssr15023 | 1 | 25 | - | TSS region | transcription start site region 15023 | |
Tssr10000 | 1 | 25 | + | TSS region | transcription start site region 10000 | |
Tssr10001 | 1 | 17 | + | TSS region | transcription start site region 10001 | |
Adamts4 | 1 | 9500 | + | protein coding gene | a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 4 | |
Tssr10002 | 1 | 2 | + | TSS region | transcription start site region 10002 | |
Tssr15024 | 1 | 11 | - | TSS region | transcription start site region 15024 | |
Cpgi1017 | 1 | 177 | CpG island | CpG island 1017 | ||
Cpgi1018 | 1 | 205 | CpG island | CpG island 1018 | ||
Tssr10003 | 1 | 6 | + | TSS region | transcription start site region 10003 | |
Cpgi1019 | 1 | 782 | CpG island | CpG island 1019 | ||
Tssr10004 | 1 | 39 | + | TSS region | transcription start site region 10004 | |
B4galt3 | 1 | 6567 | + | protein coding gene | UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 3 | |
Tssr10005 | 1 | 11 | + | TSS region | transcription start site region 10005 | |
Tssr10006 | 1 | 2 | + | TSS region | transcription start site region 10006 | |
Ppox | 1 | 4201 | - | protein coding gene | protoporphyrinogen oxidase | |
Cpgi1020 | 1 | 918 | CpG island | CpG island 1020 | ||
Tssr15025 | 1 | 37 | - | TSS region | transcription start site region 15025 | |
Tssr15026 | 1 | 19 | - | TSS region | transcription start site region 15026 | |
Tssr15027 | 1 | 39 | - | TSS region | transcription start site region 15027 | |
Tssr15028 | 1 | 11 | - | TSS region | transcription start site region 15028 | |
Tssr10007 | 1 | 12 | + | TSS region | transcription start site region 10007 | |
Usp21 | 1 | 6012 | - | protein coding gene | ubiquitin specific peptidase 21 | |
Cpgi1021 | 1 | 811 | CpG island | CpG island 1021 | ||
Tssr15029 | 1 | 13 | - | TSS region | transcription start site region 15029 | |
Tssr15030 | 1 | 45 | - | TSS region | transcription start site region 15030 | |
Tssr10008 | 1 | 9 | + | TSS region | transcription start site region 10008 | |
Tssr10009 | 1 | 11 | + | TSS region | transcription start site region 10009 | |
Ufc1 | 1 | 6418 | - | protein coding gene | ubiquitin-fold modifier conjugating enzyme 1 | |
Cpgi1022 | 1 | 397 | CpG island | CpG island 1022 | ||
Tssr15031 | 1 | 35 | - | TSS region | transcription start site region 15031 | |
Tssr15032 | 1 | 15 | - | TSS region | transcription start site region 15032 | |
Tssr15033 | 1 | 74 | - | TSS region | transcription start site region 15033 | |
Rpl27-ps1 | 1 | 407 | - | pseudogene | ribosomal protein L27, pseudogene 1 | |
Gm25151 | 1 | 90 | + | snoRNA gene | predicted gene, 25151 | |
Tssr10010 | 1 | 6 | + | TSS region | transcription start site region 10010 | |
Gm20045 | 1 | 5576 | - | lincRNA gene | predicted gene, 20045 | |
Cpgi1023 | 1 | 1421 | CpG island | CpG island 1023 |