Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:170824187-170935878

43 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Atf6	1	170704674 to 170867771	163097	-	protein coding gene	activating transcription factor 6
Tssr14926	1	170824817 to 170824820	3	-	TSS region	transcription start site region 14926
Gm25235	1	170832765 to 170832871	106	-	snRNA gene	predicted gene, 25235
Tssr14927	1	170841771 to 170841790	19	-	TSS region	transcription start site region 14927
Tssr14928	1	170845787 to 170845800	13	-	TSS region	transcription start site region 14928
D1Mit270	1	170848421 to 170848536	115		DNA segment	DNA segment, Chr 1, Massachusetts Institute of Technology 270
Nhdlt1	1	170848421 to 170848536	115		QTL	non-HDL cholesterol and triglyceride levels 1
Gm29733	1	170850526 to 170851536	1010	-	protein coding gene	predicted gene, 29733
Tssr14929	1	170857453 to 170857463	10	-	TSS region	transcription start site region 14929
Tssr14930	1	170857494 to 170857513	19	-	TSS region	transcription start site region 14930
Cpgi997	1	170867210 to 170867958	748		CpG island	CpG island 997
Tssr14931	1	170867733 to 170867742	9	-	TSS region	transcription start site region 14931
Tssr14932	1	170867745 to 170867756	11	-	TSS region	transcription start site region 14932
Tssr14933	1	170867761 to 170867784	23	-	TSS region	transcription start site region 14933
Tssr14934	1	170867789 to 170867800	11	-	TSS region	transcription start site region 14934
Tssr14935	1	170867803 to 170867814	11	-	TSS region	transcription start site region 14935
Tssr14936	1	170868605 to 170868639	34	-	TSS region	transcription start site region 14936
Gm9929	1	170868645 to 170881721	13076	+	unclassified non-coding RNA gene	predicted gene 9929
Cpgi998	1	170868661 to 170868991	330		CpG island	CpG island 998
Tssr9934	1	170868676 to 170868707	31	+	TSS region	transcription start site region 9934
Tssr9935	1	170868708 to 170868720	12	+	TSS region	transcription start site region 9935
Dusp12	1	170874187 to 170885878	11691	-	protein coding gene	dual specificity phosphatase 12
Cpgi999	1	170884830 to 170885579	749		CpG island	CpG island 999
Gm26620	1	170885065 to 170885881	816	+	protein coding gene	predicted gene, 26620
Tssr9936	1	170885083 to 170885098	15	+	TSS region	transcription start site region 9936
Tssr14937	1	170885142 to 170885198	56	-	TSS region	transcription start site region 14937
Opefa	1	170885284 to 170885284	0		QTL	open field activity
Tssr14938	1	170885388 to 170885446	58	-	TSS region	transcription start site region 14938
Tssr14939	1	170885452 to 170885467	15	-	TSS region	transcription start site region 14939
Tssr14940	1	170906994 to 170906998	4	-	TSS region	transcription start site region 14940
Fcrlb	1	170907273 to 170912941	5668	-	protein coding gene	Fc receptor-like B
Cpgi1000	1	170907291 to 170908922	1631		CpG island	CpG island 1000
Tssr14941	1	170913665 to 170913668	3	-	TSS region	transcription start site region 14941
Tssr14942	1	170913682 to 170913703	21	-	TSS region	transcription start site region 14942
Tssr14943	1	170913716 to 170913749	33	-	TSS region	transcription start site region 14943
Tssr14944	1	170913754 to 170913759	5	-	TSS region	transcription start site region 14944
Fcrla	1	170917594 to 170927583	9989	-	protein coding gene	Fc receptor-like A
Gm2962	1	170925309 to 170925644	335	-	pseudogene	predicted pseudogene 2962
Tssr14945	1	170925656 to 170925659	3	-	TSS region	transcription start site region 14945
Tssr14946	1	170927519 to 170927531	12	-	TSS region	transcription start site region 14946
Tssr14947	1	170927540 to 170927566	26	-	TSS region	transcription start site region 14947
Tssr14948	1	170927567 to 170927583	16	-	TSS region	transcription start site region 14948
Gm37030	1	170935771 to 170936065	294	+	pseudogene	predicted gene, 37030