Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:17045373-17264271

19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm28376	1	16898185 to 17091631	193446	+	antisense lncRNA gene	predicted gene 28376
Jph1	1	16964560 to 17097889	133329	-	protein coding gene	junctophilin 1
Tssr11058	1	17082458 to 17082462	4	-	TSS region	transcription start site region 11058
Cpgi59	1	17091546 to 17092089	543		CpG island	CpG island 59
Cpgi60	1	17096653 to 17098194	1541		CpG island	CpG island 60
Tssr11059	1	17097708 to 17097713	5	-	TSS region	transcription start site region 11059
Tssr15	1	17097749 to 17097753	4	-	TSS region	transcription start site region 15
Tssr11060	1	17097798 to 17097806	8	-	TSS region	transcription start site region 11060
Tssr11061	1	17097839 to 17097872	33	-	TSS region	transcription start site region 11061
Gm46085	1	17097969 to 17100793	2824	+	lncRNA gene	predicted gene, 46085
Tssr6015	1	17098090 to 17098130	40	+	TSS region	transcription start site region 6015
Gm31982	1	17098573 to 17124568	25995	-	lncRNA gene	predicted gene, 31982
Gm28783	1	17124747 to 17128956	4209	+	lincRNA gene	predicted gene 28783
Cpgi61	1	17145342 to 17145799	457		CpG island	CpG island 61
Tssr6016	1	17145357 to 17145431	74	+	TSS region	transcription start site region 6016
Gdap1	1	17145373 to 17164271	18898	+	protein coding gene	ganglioside-induced differentiation-associated-protein 1
Gm28784	1	17168403 to 17173103	4700	+	lincRNA gene	predicted gene 28784
Gm39597	1	17202970 to 17205577	2607	+	lncRNA gene	predicted gene, 39597
Gm28785	1	17250114 to 17250492	378	-	pseudogene	predicted gene 28785