Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:170215467-170689849

41 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Sle1a	1	168358674 to 170239759	1881085		QTL	systematic lupus erythematosus susceptibility 1a
Cpgi992	1	170214730 to 170215479	749		CpG island	CpG island 992
4930500M09Rik	1	170214860 to 170216422	1562	+	antisense lncRNA gene	RIKEN cDNA 4930500M09 gene
Sh2d1b2	1	170232871 to 170251587	18716	+	protein coding gene	SH2 domain containing 1B2
D1Mit353	1	170239646 to 170239759	113		DNA segment	DNA segment, Chr 1, Massachusetts Institute of Technology 353
D1Mit508	1	170239666 to 170239913	247		DNA segment	DNA Segment, Chr 1 Massachusetts Institute of Technology 508
Gm6345	1	170254049 to 170255739	1690	-	pseudogene	predicted gene 6345
Cpgi993	1	170255066 to 170255838	772		CpG island	CpG island 993
Tssr14916	1	170255721 to 170255761	40	-	TSS region	transcription start site region 14916
Sh2d1b1	1	170277324 to 170285662	8338	+	protein coding gene	SH2 domain containing 1B1
Gm7694	1	170298199 to 170306332	8133	-	protein coding gene	predicted gene 7694
Tssr9922	1	170308802 to 170308828	26	+	TSS region	transcription start site region 9922
Tssr9923	1	170308836 to 170308884	48	+	TSS region	transcription start site region 9923
Spata46	1	170308861 to 170312125	3264	+	protein coding gene	spermatogenesis associated 46
Tssr9924	1	170308890 to 170308893	3	+	TSS region	transcription start site region 9924
Tssr9925	1	170309333 to 170309343	10	+	TSS region	transcription start site region 9925
Tssr14917	1	170312996 to 170312999	3	-	TSS region	transcription start site region 14917
Nos1ap	1	170314700 to 170589849	275149	-	protein coding gene	nitric oxide synthase 1 (neuronal) adaptor protein
D1Mit205	1	170413869 to 170414015	146		DNA segment	DNA segment, Chr 1, Massachusetts Institute of Technology 205
D1Mit455	1	170413888 to 170414012	124		DNA segment	DNA Segment, Chr 1, Massachusetts Institute of Technology 455
Tssr14918	1	170434262 to 170434291	29	-	TSS region	transcription start site region 14918
D1Mit473	1	170446470 to 170446608	138		DNA segment	DNA Segment, Chr 1, Massachusetts Institute of Technology-473
Gm46171	1	170533084 to 170540809	7725	-	lncRNA gene	predicted gene, 46171
Tssr14919	1	170540814 to 170540818	4	-	TSS region	transcription start site region 14919
Cpgi994	1	170589011 to 170590273	1262		CpG island	CpG island 994
Tssr14920	1	170589751 to 170589769	18	-	TSS region	transcription start site region 14920
Tssr14921	1	170589791 to 170589854	63	-	TSS region	transcription start site region 14921
Tssr9926	1	170630909 to 170630911	2	+	TSS region	transcription start site region 9926
Gm7299	1	170630921 to 170631501	580	+	pseudogene	predicted gene 7299
Tssr9927	1	170642840 to 170642851	11	+	TSS region	transcription start site region 9927
Cpgi995	1	170644170 to 170644885	715		CpG island	CpG island 995
Tssr14922	1	170644328 to 170644340	12	-	TSS region	transcription start site region 14922
Tssr280	1	170644344 to 170644351	7	-	TSS region	transcription start site region 280
Tssr14923	1	170644379 to 170644392	13	-	TSS region	transcription start site region 14923
Tssr9928	1	170644449 to 170644458	9	+	TSS region	transcription start site region 9928
Tssr9929	1	170644490 to 170644514	24	+	TSS region	transcription start site region 9929
Tssr9930	1	170644523 to 170644570	47	+	TSS region	transcription start site region 9930
Olfml2b	1	170644532 to 170682789	38257	+	protein coding gene	olfactomedin-like 2B
Tssr9931	1	170644572 to 170644586	14	+	TSS region	transcription start site region 9931
Tssr9932	1	170644589 to 170644602	13	+	TSS region	transcription start site region 9932
Tssr9933	1	170644785 to 170644837	52	+	TSS region	transcription start site region 9933