Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Scgq2 | 1 | 24555169 | QTL | spontaneous crescentic glomerulonephritis QTL 2 | ||
Leusq4 | 1 | 14201604 | QTL | leucocytosis susceptibility QTL 4 | ||
Sle1a | 1 | 1881085 | QTL | systematic lupus erythematosus susceptibility 1a | ||
Nktcn1 | 1 | 3446015 | QTL | natural killer T cell numbers 1 | ||
D1Mit524 | 1 | 114 | DNA segment | DNA Segment, Chr 1, Massachusetts Institute of Technology-524 | ||
Gm37586 | 1 | 203 | + | pseudogene | predicted gene, 37586 | |
Gm39699 | 1 | 2559 | + | lncRNA gene | predicted gene, 39699 | |
Ccdc190 | 1 | 6005 | + | protein coding gene | coiled-coil domain containing 190 | |
Tssr9918 | 1 | 8 | + | TSS region | transcription start site region 9918 | |
Tssr277 | 1 | 42 | + | TSS region | transcription start site region 277 | |
Gm15852 | 1 | 1550 | - | unclassified non-coding RNA gene | predicted gene 15852 | |
Hsd17b7 | 1 | 19705 | - | protein coding gene | hydroxysteroid (17-beta) dehydrogenase 7 | |
Cpgi990 | 1 | 636 | CpG island | CpG island 990 | ||
Tssr14894 | 1 | 75 | - | TSS region | transcription start site region 14894 | |
3110045C21Rik | 1 | 2987 | + | antisense lncRNA gene | RIKEN cDNA 3110045C21 gene | |
Tssr9919 | 1 | 26 | + | TSS region | transcription start site region 9919 | |
Tssr9920 | 1 | 8 | + | TSS region | transcription start site region 9920 | |
Ddr2 | 1 | 138455 | - | protein coding gene | discoidin domain receptor family, member 2 | |
Tssr14895 | 1 | 14 | - | TSS region | transcription start site region 14895 | |
Tssr14896 | 1 | 13 | - | TSS region | transcription start site region 14896 | |
Tssr278 | 1 | 2 | + | TSS region | transcription start site region 278 | |
Tssr14897 | 1 | 17 | - | TSS region | transcription start site region 14897 | |
Tssr14898 | 1 | 15 | - | TSS region | transcription start site region 14898 | |
Tssr14899 | 1 | 39 | - | TSS region | transcription start site region 14899 | |
Tssr14900 | 1 | 41 | - | TSS region | transcription start site region 14900 | |
Tssr14901 | 1 | 6 | - | TSS region | transcription start site region 14901 | |
Tssr14902 | 1 | 79 | - | TSS region | transcription start site region 14902 | |
Tssr14903 | 1 | 5 | - | TSS region | transcription start site region 14903 | |
Tssr279 | 1 | 16 | - | TSS region | transcription start site region 279 | |
Tssr14904 | 1 | 37 | - | TSS region | transcription start site region 14904 | |
Tssr14905 | 1 | 11 | - | TSS region | transcription start site region 14905 | |
Uap1 | 1 | 33019 | - | protein coding gene | UDP-N-acetylglucosamine pyrophosphorylase 1 | |
Cpgi991 | 1 | 1309 | CpG island | CpG island 991 | ||
Tssr14906 | 1 | 15 | - | TSS region | transcription start site region 14906 | |
Tssr14907 | 1 | 11 | - | TSS region | transcription start site region 14907 | |
Tssr14908 | 1 | 15 | - | TSS region | transcription start site region 14908 | |
Tssr14909 | 1 | 51 | - | TSS region | transcription start site region 14909 | |
Tssr14910 | 1 | 42 | - | TSS region | transcription start site region 14910 | |
Gm37748 | 1 | 1139 | + | lincRNA gene | predicted gene, 37748 | |
Gm37502 | 1 | 2390 | - | lincRNA gene | predicted gene, 37502 | |
Tssr14911 | 1 | 24 | - | TSS region | transcription start site region 14911 | |
Uhmk1 | 1 | 16179 | - | protein coding gene | U2AF homology motif (UHM) kinase 1 | |
Tssr14912 | 1 | 3 | - | TSS region | transcription start site region 14912 | |
Tssr14913 | 1 | 7 | - | TSS region | transcription start site region 14913 | |
Tssr14914 | 1 | 6 | - | TSS region | transcription start site region 14914 | |
Cpgi992 | 1 | 749 | CpG island | CpG island 992 | ||
Tssr9921 | 1 | 37 | + | TSS region | transcription start site region 9921 | |
4930500M09Rik | 1 | 1562 | + | antisense lncRNA gene | RIKEN cDNA 4930500M09 gene | |
Tssr14915 | 1 | 40 | - | TSS region | transcription start site region 14915 | |
Sh2d1b2 | 1 | 18716 | + | protein coding gene | SH2 domain containing 1B2 | |
D1Mit353 | 1 | 113 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 353 | ||
D1Mit508 | 1 | 247 | DNA segment | DNA Segment, Chr 1 Massachusetts Institute of Technology 508 | ||
Gm6345 | 1 | 1690 | - | pseudogene | predicted gene 6345 | |
Cpgi993 | 1 | 772 | CpG island | CpG island 993 | ||
Tssr14916 | 1 | 40 | - | TSS region | transcription start site region 14916 | |
Sh2d1b1 | 1 | 8338 | + | protein coding gene | SH2 domain containing 1B1 | |
Gm7694 | 1 | 8133 | - | protein coding gene | predicted gene 7694 | |
Tssr9922 | 1 | 26 | + | TSS region | transcription start site region 9922 | |
Tssr9923 | 1 | 48 | + | TSS region | transcription start site region 9923 | |
Spata46 | 1 | 3264 | + | protein coding gene | spermatogenesis associated 46 | |
Tssr9924 | 1 | 3 | + | TSS region | transcription start site region 9924 | |
Tssr9925 | 1 | 10 | + | TSS region | transcription start site region 9925 | |
Tssr14917 | 1 | 3 | - | TSS region | transcription start site region 14917 | |
Nos1ap | 1 | 275149 | - | protein coding gene | nitric oxide synthase 1 (neuronal) adaptor protein | |
D1Mit205 | 1 | 146 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 205 | ||
D1Mit455 | 1 | 124 | DNA segment | DNA Segment, Chr 1, Massachusetts Institute of Technology 455 | ||
Tssr14918 | 1 | 29 | - | TSS region | transcription start site region 14918 | |
D1Mit473 | 1 | 138 | DNA segment | DNA Segment, Chr 1, Massachusetts Institute of Technology-473 | ||
Gm46171 | 1 | 7725 | - | lncRNA gene | predicted gene, 46171 | |
Tssr14919 | 1 | 4 | - | TSS region | transcription start site region 14919 | |
Cpgi994 | 1 | 1262 | CpG island | CpG island 994 | ||
Tssr14920 | 1 | 18 | - | TSS region | transcription start site region 14920 | |
Tssr14921 | 1 | 63 | - | TSS region | transcription start site region 14921 | |
Tssr9926 | 1 | 2 | + | TSS region | transcription start site region 9926 | |
Gm7299 | 1 | 580 | + | pseudogene | predicted gene 7299 | |
Tssr9927 | 1 | 11 | + | TSS region | transcription start site region 9927 | |
Cpgi995 | 1 | 715 | CpG island | CpG island 995 | ||
Tssr14922 | 1 | 12 | - | TSS region | transcription start site region 14922 | |
Tssr280 | 1 | 7 | - | TSS region | transcription start site region 280 | |
Tssr14923 | 1 | 13 | - | TSS region | transcription start site region 14923 | |
Tssr9928 | 1 | 9 | + | TSS region | transcription start site region 9928 | |
Tssr9929 | 1 | 24 | + | TSS region | transcription start site region 9929 | |
Tssr9930 | 1 | 47 | + | TSS region | transcription start site region 9930 | |
Olfml2b | 1 | 38257 | + | protein coding gene | olfactomedin-like 2B | |
Tssr9931 | 1 | 14 | + | TSS region | transcription start site region 9931 | |
Tssr9932 | 1 | 13 | + | TSS region | transcription start site region 9932 | |
Tssr9933 | 1 | 52 | + | TSS region | transcription start site region 9933 | |
Tssr281 | 1 | 28 | + | TSS region | transcription start site region 281 | |
Atf6 | 1 | 163097 | - | protein coding gene | activating transcription factor 6 | |
Tssr282 | 1 | 3 | + | TSS region | transcription start site region 282 | |
Tssr283 | 1 | 11 | + | TSS region | transcription start site region 283 | |
Gm23523 | 1 | 106 | - | snRNA gene | predicted gene, 23523 | |
Tssr14924 | 1 | 1 | - | TSS region | transcription start site region 14924 | |
Cpgi996 | 1 | 158 | CpG island | CpG island 996 | ||
Tssr14925 | 1 | 41 | - | TSS region | transcription start site region 14925 | |
Tssr14926 | 1 | 3 | - | TSS region | transcription start site region 14926 | |
Gm25235 | 1 | 106 | - | snRNA gene | predicted gene, 25235 | |
Tssr14927 | 1 | 19 | - | TSS region | transcription start site region 14927 | |
Tssr14928 | 1 | 13 | - | TSS region | transcription start site region 14928 | |
Nhdlt1 | 1 | 115 | QTL | non-HDL cholesterol and triglyceride levels 1 | ||
D1Mit270 | 1 | 115 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 270 | ||
Gm29733 | 1 | 1010 | - | protein coding gene | predicted gene, 29733 | |
Tssr14929 | 1 | 10 | - | TSS region | transcription start site region 14929 | |
Tssr14930 | 1 | 19 | - | TSS region | transcription start site region 14930 | |
Cpgi997 | 1 | 748 | CpG island | CpG island 997 | ||
Tssr14931 | 1 | 9 | - | TSS region | transcription start site region 14931 | |
Tssr14932 | 1 | 11 | - | TSS region | transcription start site region 14932 | |
Tssr14933 | 1 | 23 | - | TSS region | transcription start site region 14933 | |
Tssr14934 | 1 | 11 | - | TSS region | transcription start site region 14934 | |
Tssr14935 | 1 | 11 | - | TSS region | transcription start site region 14935 | |
Tssr14936 | 1 | 34 | - | TSS region | transcription start site region 14936 | |
Gm9929 | 1 | 13076 | + | unclassified non-coding RNA gene | predicted gene 9929 | |
Cpgi998 | 1 | 330 | CpG island | CpG island 998 | ||
Tssr9934 | 1 | 31 | + | TSS region | transcription start site region 9934 | |
Tssr9935 | 1 | 12 | + | TSS region | transcription start site region 9935 | |
Dusp12 | 1 | 11691 | - | protein coding gene | dual specificity phosphatase 12 | |
Cpgi999 | 1 | 749 | CpG island | CpG island 999 | ||
Gm26620 | 1 | 816 | + | protein coding gene | predicted gene, 26620 | |
Tssr9936 | 1 | 15 | + | TSS region | transcription start site region 9936 | |
Tssr14937 | 1 | 56 | - | TSS region | transcription start site region 14937 | |
Opefa | 1 | 0 | QTL | open field activity | ||
Tssr14938 | 1 | 58 | - | TSS region | transcription start site region 14938 | |
Tssr14939 | 1 | 15 | - | TSS region | transcription start site region 14939 | |
Tssr14940 | 1 | 4 | - | TSS region | transcription start site region 14940 | |
Fcrlb | 1 | 5668 | - | protein coding gene | Fc receptor-like B | |
Cpgi1000 | 1 | 1631 | CpG island | CpG island 1000 | ||
Tssr14941 | 1 | 3 | - | TSS region | transcription start site region 14941 | |
Tssr14942 | 1 | 21 | - | TSS region | transcription start site region 14942 | |
Tssr14943 | 1 | 33 | - | TSS region | transcription start site region 14943 | |
Tssr14944 | 1 | 5 | - | TSS region | transcription start site region 14944 | |
Fcrla | 1 | 9989 | - | protein coding gene | Fc receptor-like A | |
Gm2962 | 1 | 335 | - | pseudogene | predicted pseudogene 2962 | |
Tssr14945 | 1 | 3 | - | TSS region | transcription start site region 14945 | |
Tssr14946 | 1 | 12 | - | TSS region | transcription start site region 14946 | |
Tssr14947 | 1 | 26 | - | TSS region | transcription start site region 14947 | |
Tssr14948 | 1 | 16 | - | TSS region | transcription start site region 14948 | |
Gm37030 | 1 | 294 | + | pseudogene | predicted gene, 37030 | |
Gm39701 | 1 | 4655 | + | protein coding gene | predicted gene, 39701 | |
Tssr14949 | 1 | 22 | - | TSS region | transcription start site region 14949 | |
Tssr14950 | 1 | 32 | - | TSS region | transcription start site region 14950 | |
Tssr14951 | 1 | 23 | - | TSS region | transcription start site region 14951 | |
Tssr284 | 1 | 5 | - | TSS region | transcription start site region 284 | |
Tssr14952 | 1 | 11 | - | TSS region | transcription start site region 14952 | |
Tssr14953 | 1 | 11 | - | TSS region | transcription start site region 14953 | |
Del(1Fcgr2b-Fcgr3)1Rav | 1 | 104377 | chromosomal deletion | deletion, Chr 1, Jeffrey V Ravetch 1 | ||
Del(1Fcgr2b-Fcgr3)1Vlcg | 1 | 104377 | chromosomal deletion | deletion, Chr1, Regeneron Pharmaceuticals | ||
Fcgr2b | 1 | 15513 | - | protein coding gene | Fc receptor, IgG, low affinity IIb | |
Tssr14954 | 1 | 11 | - | TSS region | transcription start site region 14954 | |
Tssr14955 | 1 | 20 | - | TSS region | transcription start site region 14955 | |
D1Mit147 | 1 | 340 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 147 | ||
Tssr14956 | 1 | 16 | - | TSS region | transcription start site region 14956 | |
Tssr14957 | 1 | 38 | - | TSS region | transcription start site region 14957 | |
Tssr14958 | 1 | 21 | - | TSS region | transcription start site region 14958 | |
D1Dcr16 | 1 | 102 | DNA segment | DNA Segment, Chr 1, Derry C. Roopenian 16 | ||
D1Mit148 | 1 | 118 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 148 | ||
Tssr14959 | 1 | 2 | - | TSS region | transcription start site region 14959 | |
Tssr14960 | 1 | 8 | - | TSS region | transcription start site region 14960 | |
Gm38204 | 1 | 4373 | + | antisense lncRNA gene | predicted gene, 38204 | |
Tssr14961 | 1 | 11 | - | TSS region | transcription start site region 14961 | |
Tssr14962 | 1 | 15 | - | TSS region | transcription start site region 14962 | |
Tssr14963 | 1 | 62 | - | TSS region | transcription start site region 14963 | |
Tssr14964 | 1 | 8 | - | TSS region | transcription start site region 14964 | |
Tssr14965 | 1 | 41 | - | TSS region | transcription start site region 14965 | |
Gm34968 | 1 | 1893 | - | lncRNA gene | predicted gene, 34968 | |
Tssr14966 | 1 | 29 | - | TSS region | transcription start site region 14966 | |
Tssr9937 | 1 | 11 | + | TSS region | transcription start site region 9937 | |
Tssr9938 | 1 | 5 | + | TSS region | transcription start site region 9938 | |
Gm10522 | 1 | 2607 | + | lincRNA gene | predicted gene 10522 | |
Tssr9939 | 1 | 8 | + | TSS region | transcription start site region 9939 | |
Tssr9940 | 1 | 4 | + | TSS region | transcription start site region 9940 | |
D1Mit146 | 1 | 119 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 146 | ||
D1Dcr17 | 1 | 93 | DNA segment | DNA Segment, Chr 1, Derry C. Roopenian 17 | ||
Tssr9941 | 1 | 29 | + | TSS region | transcription start site region 9941 | |
Tssr9942 | 1 | 46 | + | TSS region | transcription start site region 9942 | |
Tssr14967 | 1 | 44 | - | TSS region | transcription start site region 14967 | |
Tssr9943 | 1 | 12 | + | TSS region | transcription start site region 9943 | |
Tssr9944 | 1 | 7 | + | TSS region | transcription start site region 9944 | |
Fcgr4 | 1 | 10835 | + | protein coding gene | Fc receptor, IgG, low affinity IV | |
Tssr9945 | 1 | 38 | + | TSS region | transcription start site region 9945 | |
Tssr9946 | 1 | 13 | + | TSS region | transcription start site region 9946 | |
Tssr9947 | 1 | 11 | + | TSS region | transcription start site region 9947 | |
Tssr9948 | 1 | 17 | + | TSS region | transcription start site region 9948 | |
Tssr9949 | 1 | 2 | + | TSS region | transcription start site region 9949 | |
Tssr9950 | 1 | 14 | + | TSS region | transcription start site region 9950 | |
Tssr9951 | 1 | 11 | + | TSS region | transcription start site region 9951 | |
Gm26110 | 1 | 164 | + | snRNA gene | predicted gene, 26110 | |
Tssr9952 | 1 | 18 | + | TSS region | transcription start site region 9952 | |
Tssr9953 | 1 | 12 | + | TSS region | transcription start site region 9953 | |
Tssr9954 | 1 | 13 | + | TSS region | transcription start site region 9954 | |
Tssr9955 | 1 | 19 | + | TSS region | transcription start site region 9955 | |
Tssr9956 | 1 | 15 | + | TSS region | transcription start site region 9956 | |
Tssr9957 | 1 | 13 | + | TSS region | transcription start site region 9957 | |
Tssr9958 | 1 | 7 | + | TSS region | transcription start site region 9958 | |
Tssr9959 | 1 | 4 | + | TSS region | transcription start site region 9959 | |
Cpgi1001 | 1 | 191 | CpG island | CpG island 1001 | ||
Gm35090 | 1 | 788 | - | lncRNA gene | predicted gene, 35090 | |
Cpgi1002 | 1 | 552 | CpG island | CpG island 1002 | ||
n-TNgtt6 | 1 | 73 | - | tRNA gene | nuclear encoded tRNA asparagine 6 (anticodon GTT) | |
n-TDgtc4 | 1 | 71 | - | tRNA gene | nuclear encoded tRNA aspartic acid 4 (anticodon GTC) | |
n-TGtcc2 | 1 | 71 | - | tRNA gene | nuclear encoded tRNA glycine 2 (anticodon TCC) |