| Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
|---|---|---|---|---|---|---|
| Scgq2 | 1 | 24555169 | QTL | spontaneous crescentic glomerulonephritis QTL 2 | ||
| Nidd3k | 1 | 21961824 | QTL | Nidd3 on KK-A |
||
| Leusq4 | 1 | 14201604 | QTL | leucocytosis susceptibility QTL 4 | ||
| Cfcd | 1 | 1210422 | QTL | contextual fear conditioning | ||
| Nktcn1 | 1 | 3446015 | QTL | natural killer T cell numbers 1 | ||
| Sle1a | 1 | 1881085 | QTL | systematic lupus erythematosus susceptibility 1a | ||
| D1Mit112 | 1 | 177 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 112 | ||
| Bmd5b | 1 | 2930524 | QTL | bone mineral density 5b | ||
| D1Mit111 | 1 | 169 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 111 | ||
| Nba2 | 1 | 169 | QTL | New Zealand Black autoimmunity 2 | ||
| Mir6354 | 1 | 115 | - | miRNA gene | microRNA 6354 | |
| Tssr14888 | 1 | 9 | - | TSS region | transcription start site region 14888 | |
| Tssr14889 | 1 | 5 | - | TSS region | transcription start site region 14889 | |
| Tssr14890 | 1 | 2 | - | TSS region | transcription start site region 14890 | |
| Gm39697 | 1 | 44651 | - | lncRNA gene | predicted gene, 39697 | |
| Sle16 | 1 | 8338849 | QTL | systematic lupus erythematosus susceptibility 16 | ||
| Lbw7 | 1 | 172 | QTL | lupus NZB x NZW 7 | ||
| Sle1 | 1 | 172 | QTL | systemic lupus erythmatosus susceptibility 1 | ||
| D1Mit36 | 1 | 172 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 36 | ||
| Cgnz1 | 1 | 172 | QTL | chronic glomerulonephritis in NZM 1 | ||
| Cfmq1 | 1 | 172 | QTL | cystic fibrosis modifier QTL 1 | ||
| Lprq3 | 1 | 172 | QTL | lipoprotein QTL 3 | ||
| Bbaa30 | 1 | 5417698 | QTL | B.burgdorferi-associated arthritis 30 | ||
| D1Mit402 | 1 | 103 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 402 | ||
| Gm34421 | 1 | 6266 | + | lncRNA gene | predicted gene, 34421 | |
| Ewc1 | 1 | 0 | QTL | ethanol withdrawal and consumption 1 | ||
| Hdlq107 | 1 | 0 | QTL | HDL QTL 107 | ||
| Tcq11 | 1 | 10510000 | QTL | total cholesterol QTL 11 | ||
| Gm37839 | 1 | 19103 | - | lincRNA gene | predicted gene, 37839 | |
| Gm34477 | 1 | 5774 | + | lncRNA gene | predicted gene, 34477 | |
| Gm5265 | 1 | 341 | - | pseudogene | predicted pseudogene 5265 | |
| Gm34535 | 1 | 7789 | + | lncRNA gene | predicted gene, 34535 | |
| Nuf2 | 1 | 33530 | - | protein coding gene | NUF2, NDC80 kinetochore complex component | |
| Cpgi989 | 1 | 508 | CpG island | CpG island 989 | ||
| Tssr14891 | 1 | 94 | - | TSS region | transcription start site region 14891 | |
| Tssr14892 | 1 | 13 | - | TSS region | transcription start site region 14892 | |
| Gm34624 | 1 | 10941 | + | lncRNA gene | predicted gene, 34624 | |
| Gm18900 | 1 | 583 | - | pseudogene | predicted gene, 18900 | |
| Gm36980 | 1 | 1155 | - | pseudogene | predicted gene, 36980 | |
| Tssr9914 | 1 | 15 | + | TSS region | transcription start site region 9914 | |
| Rgs5 | 1 | 40312 | + | protein coding gene | regulator of G-protein signaling 5 | |
| Tssr9915 | 1 | 5 | + | TSS region | transcription start site region 9915 | |
| Tssr9916 | 1 | 29 | + | TSS region | transcription start site region 9916 | |
| Tssr9917 | 1 | 20 | + | TSS region | transcription start site region 9917 | |
| Tssr276 | 1 | 25 | + | TSS region | transcription start site region 276 | |
| Rgs4 | 1 | 6165 | - | protein coding gene | regulator of G-protein signaling 4 | |
| Tssr14893 | 1 | 15 | - | TSS region | transcription start site region 14893 | |
| Gm39698 | 1 | 8477 | - | lncRNA gene | predicted gene, 39698 | |
| Gm22114 | 1 | 106 | - | snRNA gene | predicted gene, 22114 | |
| D1Mit524 | 1 | 114 | DNA segment | DNA Segment, Chr 1, Massachusetts Institute of Technology-524 | ||
| Gm37586 | 1 | 203 | + | pseudogene | predicted gene, 37586 | |
| Gm39699 | 1 | 2559 | + | lncRNA gene | predicted gene, 39699 | |
| Ccdc190 | 1 | 6005 | + | protein coding gene | coiled-coil domain containing 190 | |
| Tssr9918 | 1 | 8 | + | TSS region | transcription start site region 9918 | |
| Tssr277 | 1 | 42 | + | TSS region | transcription start site region 277 | |
| Gm15852 | 1 | 1550 | - | unclassified non-coding RNA gene | predicted gene 15852 | |
| Hsd17b7 | 1 | 19705 | - | protein coding gene | hydroxysteroid (17-beta) dehydrogenase 7 | |
| Cpgi990 | 1 | 636 | CpG island | CpG island 990 | ||
| Tssr14894 | 1 | 75 | - | TSS region | transcription start site region 14894 | |
| 3110045C21Rik | 1 | 2987 | + | antisense lncRNA gene | RIKEN cDNA 3110045C21 gene | |
| Tssr9919 | 1 | 26 | + | TSS region | transcription start site region 9919 | |
| Tssr9920 | 1 | 8 | + | TSS region | transcription start site region 9920 | |
| Ddr2 | 1 | 138455 | - | protein coding gene | discoidin domain receptor family, member 2 | |
| Tssr14895 | 1 | 14 | - | TSS region | transcription start site region 14895 | |
| Tssr14896 | 1 | 13 | - | TSS region | transcription start site region 14896 | |
| Tssr278 | 1 | 2 | + | TSS region | transcription start site region 278 | |
| Tssr14897 | 1 | 17 | - | TSS region | transcription start site region 14897 | |
| Tssr14898 | 1 | 15 | - | TSS region | transcription start site region 14898 | |
| Tssr14899 | 1 | 39 | - | TSS region | transcription start site region 14899 | |
| Tssr14900 | 1 | 41 | - | TSS region | transcription start site region 14900 | |
| Tssr14901 | 1 | 6 | - | TSS region | transcription start site region 14901 | |
| Tssr14902 | 1 | 79 | - | TSS region | transcription start site region 14902 | |
| Tssr14903 | 1 | 5 | - | TSS region | transcription start site region 14903 | |
| Tssr279 | 1 | 16 | - | TSS region | transcription start site region 279 | |
| Tssr14904 | 1 | 37 | - | TSS region | transcription start site region 14904 | |
| Tssr14905 | 1 | 11 | - | TSS region | transcription start site region 14905 | |
| Uap1 | 1 | 33019 | - | protein coding gene | UDP-N-acetylglucosamine pyrophosphorylase 1 | |
| Cpgi991 | 1 | 1309 | CpG island | CpG island 991 | ||
| Tssr14906 | 1 | 15 | - | TSS region | transcription start site region 14906 | |
| Tssr14907 | 1 | 11 | - | TSS region | transcription start site region 14907 | |
| Tssr14908 | 1 | 15 | - | TSS region | transcription start site region 14908 | |
| Tssr14909 | 1 | 51 | - | TSS region | transcription start site region 14909 | |
| Tssr14910 | 1 | 42 | - | TSS region | transcription start site region 14910 | |
| Gm37748 | 1 | 1139 | + | lincRNA gene | predicted gene, 37748 | |
| Gm37502 | 1 | 2390 | - | lincRNA gene | predicted gene, 37502 | |
| Tssr14911 | 1 | 24 | - | TSS region | transcription start site region 14911 | |
| Uhmk1 | 1 | 16179 | - | protein coding gene | U2AF homology motif (UHM) kinase 1 | |
| Tssr14912 | 1 | 3 | - | TSS region | transcription start site region 14912 | |
| Tssr14913 | 1 | 7 | - | TSS region | transcription start site region 14913 | |
| Tssr14914 | 1 | 6 | - | TSS region | transcription start site region 14914 | |
| Cpgi992 | 1 | 749 | CpG island | CpG island 992 | ||
| Tssr9921 | 1 | 37 | + | TSS region | transcription start site region 9921 | |
| 4930500M09Rik | 1 | 1562 | + | antisense lncRNA gene | RIKEN cDNA 4930500M09 gene | |
| Tssr14915 | 1 | 40 | - | TSS region | transcription start site region 14915 | |
| Sh2d1b2 | 1 | 18716 | + | protein coding gene | SH2 domain containing 1B2 | |
| D1Mit353 | 1 | 113 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 353 | ||
| D1Mit508 | 1 | 247 | DNA segment | DNA Segment, Chr 1 Massachusetts Institute of Technology 508 | ||
| Gm6345 | 1 | 1690 | - | pseudogene | predicted gene 6345 | |
| Cpgi993 | 1 | 772 | CpG island | CpG island 993 | ||
| Tssr14916 | 1 | 40 | - | TSS region | transcription start site region 14916 | |
| Sh2d1b1 | 1 | 8338 | + | protein coding gene | SH2 domain containing 1B1 | |
| Gm7694 | 1 | 8133 | - | protein coding gene | predicted gene 7694 | |
| Tssr9922 | 1 | 26 | + | TSS region | transcription start site region 9922 | |
| Tssr9923 | 1 | 48 | + | TSS region | transcription start site region 9923 | |
| Spata46 | 1 | 3264 | + | protein coding gene | spermatogenesis associated 46 | |
| Tssr9924 | 1 | 3 | + | TSS region | transcription start site region 9924 | |
| Tssr9925 | 1 | 10 | + | TSS region | transcription start site region 9925 | |
| Tssr14917 | 1 | 3 | - | TSS region | transcription start site region 14917 | |
| Nos1ap | 1 | 275149 | - | protein coding gene | nitric oxide synthase 1 (neuronal) adaptor protein | |
| D1Mit205 | 1 | 146 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 205 | ||
| D1Mit455 | 1 | 124 | DNA segment | DNA Segment, Chr 1, Massachusetts Institute of Technology 455 | ||
| Tssr14918 | 1 | 29 | - | TSS region | transcription start site region 14918 | |
| D1Mit473 | 1 | 138 | DNA segment | DNA Segment, Chr 1, Massachusetts Institute of Technology-473 | ||
| Gm46171 | 1 | 7725 | - | lncRNA gene | predicted gene, 46171 | |
| Tssr14919 | 1 | 4 | - | TSS region | transcription start site region 14919 | |
| Cpgi994 | 1 | 1262 | CpG island | CpG island 994 | ||
| Tssr14920 | 1 | 18 | - | TSS region | transcription start site region 14920 | |
| Tssr14921 | 1 | 63 | - | TSS region | transcription start site region 14921 | |
| Tssr9926 | 1 | 2 | + | TSS region | transcription start site region 9926 | |
| Gm7299 | 1 | 580 | + | pseudogene | predicted gene 7299 | |
| Tssr9927 | 1 | 11 | + | TSS region | transcription start site region 9927 | |
| Cpgi995 | 1 | 715 | CpG island | CpG island 995 | ||
| Tssr14922 | 1 | 12 | - | TSS region | transcription start site region 14922 | |
| Tssr280 | 1 | 7 | - | TSS region | transcription start site region 280 | |
| Tssr14923 | 1 | 13 | - | TSS region | transcription start site region 14923 | |
| Tssr9928 | 1 | 9 | + | TSS region | transcription start site region 9928 | |
| Tssr9929 | 1 | 24 | + | TSS region | transcription start site region 9929 | |
| Tssr9930 | 1 | 47 | + | TSS region | transcription start site region 9930 | |
| Olfml2b | 1 | 38257 | + | protein coding gene | olfactomedin-like 2B | |
| Tssr9931 | 1 | 14 | + | TSS region | transcription start site region 9931 | |
| Tssr9932 | 1 | 13 | + | TSS region | transcription start site region 9932 | |
| Tssr9933 | 1 | 52 | + | TSS region | transcription start site region 9933 | |
| Tssr281 | 1 | 28 | + | TSS region | transcription start site region 281 | |
| Atf6 | 1 | 163097 | - | protein coding gene | activating transcription factor 6 | |
| Tssr282 | 1 | 3 | + | TSS region | transcription start site region 282 | |
| Tssr283 | 1 | 11 | + | TSS region | transcription start site region 283 | |
| Gm23523 | 1 | 106 | - | snRNA gene | predicted gene, 23523 | |
| Tssr14924 | 1 | 1 | - | TSS region | transcription start site region 14924 | |
| Cpgi996 | 1 | 158 | CpG island | CpG island 996 | ||
| Tssr14925 | 1 | 41 | - | TSS region | transcription start site region 14925 | |
| Tssr14926 | 1 | 3 | - | TSS region | transcription start site region 14926 | |
| Gm25235 | 1 | 106 | - | snRNA gene | predicted gene, 25235 | |
| Tssr14927 | 1 | 19 | - | TSS region | transcription start site region 14927 | |
| Tssr14928 | 1 | 13 | - | TSS region | transcription start site region 14928 | |
| Nhdlt1 | 1 | 115 | QTL | non-HDL cholesterol and triglyceride levels 1 | ||
| D1Mit270 | 1 | 115 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 270 | ||
| Gm29733 | 1 | 1010 | - | protein coding gene | predicted gene, 29733 | |
| Tssr14929 | 1 | 10 | - | TSS region | transcription start site region 14929 | |
| Tssr14930 | 1 | 19 | - | TSS region | transcription start site region 14930 | |
| Cpgi997 | 1 | 748 | CpG island | CpG island 997 | ||
| Tssr14931 | 1 | 9 | - | TSS region | transcription start site region 14931 | |
| Tssr14932 | 1 | 11 | - | TSS region | transcription start site region 14932 | |
| Tssr14933 | 1 | 23 | - | TSS region | transcription start site region 14933 | |
| Tssr14934 | 1 | 11 | - | TSS region | transcription start site region 14934 | |
| Tssr14935 | 1 | 11 | - | TSS region | transcription start site region 14935 | |
| Tssr14936 | 1 | 34 | - | TSS region | transcription start site region 14936 | |
| Gm9929 | 1 | 13076 | + | unclassified non-coding RNA gene | predicted gene 9929 | |
| Cpgi998 | 1 | 330 | CpG island | CpG island 998 | ||
| Tssr9934 | 1 | 31 | + | TSS region | transcription start site region 9934 | |
| Tssr9935 | 1 | 12 | + | TSS region | transcription start site region 9935 | |
| Dusp12 | 1 | 11691 | - | protein coding gene | dual specificity phosphatase 12 | |
| Cpgi999 | 1 | 749 | CpG island | CpG island 999 | ||
| Gm26620 | 1 | 816 | + | protein coding gene | predicted gene, 26620 | |
| Tssr9936 | 1 | 15 | + | TSS region | transcription start site region 9936 | |
| Tssr14937 | 1 | 56 | - | TSS region | transcription start site region 14937 | |
| Opefa | 1 | 0 | QTL | open field activity | ||
| Tssr14938 | 1 | 58 | - | TSS region | transcription start site region 14938 | |
| Tssr14939 | 1 | 15 | - | TSS region | transcription start site region 14939 | |
| Tssr14940 | 1 | 4 | - | TSS region | transcription start site region 14940 | |
| Fcrlb | 1 | 5668 | - | protein coding gene | Fc receptor-like B | |
| Cpgi1000 | 1 | 1631 | CpG island | CpG island 1000 | ||
| Tssr14941 | 1 | 3 | - | TSS region | transcription start site region 14941 | |
| Tssr14942 | 1 | 21 | - | TSS region | transcription start site region 14942 | |
| Tssr14943 | 1 | 33 | - | TSS region | transcription start site region 14943 | |
| Tssr14944 | 1 | 5 | - | TSS region | transcription start site region 14944 | |
| Fcrla | 1 | 9989 | - | protein coding gene | Fc receptor-like A | |
| Gm2962 | 1 | 335 | - | pseudogene | predicted pseudogene 2962 | |
| Tssr14945 | 1 | 3 | - | TSS region | transcription start site region 14945 | |
| Tssr14946 | 1 | 12 | - | TSS region | transcription start site region 14946 | |
| Tssr14947 | 1 | 26 | - | TSS region | transcription start site region 14947 | |
| Tssr14948 | 1 | 16 | - | TSS region | transcription start site region 14948 | |
| Gm37030 | 1 | 294 | + | pseudogene | predicted gene, 37030 | |
| Gm39701 | 1 | 4655 | + | protein coding gene | predicted gene, 39701 | |
| Tssr14949 | 1 | 22 | - | TSS region | transcription start site region 14949 | |
| Tssr14950 | 1 | 32 | - | TSS region | transcription start site region 14950 | |
| Tssr14951 | 1 | 23 | - | TSS region | transcription start site region 14951 | |
| Tssr284 | 1 | 5 | - | TSS region | transcription start site region 284 | |
| Tssr14952 | 1 | 11 | - | TSS region | transcription start site region 14952 | |
| Tssr14953 | 1 | 11 | - | TSS region | transcription start site region 14953 | |
| Del(1Fcgr2b-Fcgr3)1Rav | 1 | 104377 | chromosomal deletion | deletion, Chr 1, Jeffrey V Ravetch 1 | ||
| Del(1Fcgr2b-Fcgr3)1Vlcg | 1 | 104377 | chromosomal deletion | deletion, Chr1, Regeneron Pharmaceuticals | ||
| Fcgr2b | 1 | 15513 | - | protein coding gene | Fc receptor, IgG, low affinity IIb | |
| Tssr14954 | 1 | 11 | - | TSS region | transcription start site region 14954 | |
| Tssr14955 | 1 | 20 | - | TSS region | transcription start site region 14955 | |
| D1Mit147 | 1 | 340 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 147 | ||
| Tssr14956 | 1 | 16 | - | TSS region | transcription start site region 14956 | |
| Tssr14957 | 1 | 38 | - | TSS region | transcription start site region 14957 | |
| Tssr14958 | 1 | 21 | - | TSS region | transcription start site region 14958 | |
| D1Dcr16 | 1 | 102 | DNA segment | DNA Segment, Chr 1, Derry C. Roopenian 16 | ||
| D1Mit148 | 1 | 118 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 148 |