Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:168425863-168925873

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pbx1 1 168119364 to 168432264 312900 - protein coding gene pre B cell leukemia homeobox 1
Tssr9912 1 168430401 to 168430414 13 + TSS region transcription start site region 9912
Tssr14869 1 168431267 to 168431269 2 - TSS region transcription start site region 14869
Tssr14870 1 168431502 to 168431513 11 - TSS region transcription start site region 14870
Tssr14871 1 168431547 to 168431558 11 - TSS region transcription start site region 14871
Tssr14872 1 168431564 to 168431591 27 - TSS region transcription start site region 14872
Tssr14873 1 168431599 to 168431638 39 - TSS region transcription start site region 14873
Tssr14874 1 168431646 to 168431666 20 - TSS region transcription start site region 14874
Tssr14875 1 168431695 to 168431713 18 - TSS region transcription start site region 14875
Tssr14876 1 168431860 to 168431884 24 - TSS region transcription start site region 14876
Tssr14877 1 168431896 to 168431905 9 - TSS region transcription start site region 14877
Tssr14878 1 168431909 to 168431982 73 - TSS region transcription start site region 14878
Tssr14879 1 168432111 to 168432125 14 - TSS region transcription start site region 14879
Tssr14880 1 168432142 to 168432186 44 - TSS region transcription start site region 14880
Tssr14881 1 168432191 to 168432202 11 - TSS region transcription start site region 14881
Tssr14882 1 168432204 to 168432225 21 - TSS region transcription start site region 14882
Tssr14883 1 168432306 to 168432347 41 - TSS region transcription start site region 14883
Cpgi988 1 168432566 to 168432783 217 CpG island CpG island 988
Tssr274 1 168432573 to 168432578 5 + TSS region transcription start site region 274
Gm39696 1 168475634 to 168495913 20279 - lncRNA gene predicted gene, 39696
Mir6348 1 168490643 to 168490762 119 + miRNA gene microRNA 6348
Tssr9913 1 168502712 to 168502721 9 + TSS region transcription start site region 9913
Tssr275 1 168582818 to 168582840 22 - TSS region transcription start site region 275
Gm34320 1 168661495 to 168731546 70051 - lncRNA gene predicted gene, 34320
1700063I16Rik 1 168675272 to 168675882 610 - unclassified gene RIKEN cDNA 1700063I16 gene
Tssr14884 1 168675863 to 168675873 10 - TSS region transcription start site region 14884
Tssr14885 1 168675876 to 168675888 12 - TSS region transcription start site region 14885
Tssr14886 1 168675900 to 168675913 13 - TSS region transcription start site region 14886
D1Mit540.1 1 168755783 to 168755928 145 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 540.1
D1Mit540 1 168755906 to 168756030 124 DNA segment DNA Segment, Chr 1, Massachusetts Institute of Technology 540
Tssr14887 1 168873727 to 168873734 7 - TSS region transcription start site region 14887
D1Mit114 1 168891415 to 168891558 143 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 114