Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:168069364-168482264

39 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Lrnx12	1	112081092 to 168358833	56277741		QTL	learning-contextual 12
Hcs7	1	156774467 to 168358833	11584366		QTL	hepatocarcinogenesis susceptibility 7
Leusq1	1	156774467 to 168358833	11584366		QTL	leucocytosis susceptibility QTL 1
Gm20711	1	168004139 to 168122465	118326	+	antisense lncRNA gene	predicted gene 20711
Pbx1	1	168119364 to 168432264	312900	-	protein coding gene	pre B cell leukemia homeobox 1
Tssr14861	1	168155777 to 168155793	16	-	TSS region	transcription start site region 14861
Tssr14862	1	168215483 to 168215489	6	-	TSS region	transcription start site region 14862
Tssr14863	1	168293445 to 168293451	6	-	TSS region	transcription start site region 14863
Tssr14864	1	168323272 to 168323276	4	-	TSS region	transcription start site region 14864
Gm37524	1	168335980 to 168337671	1691	-	unclassified gene	predicted gene, 37524
Tssr14865	1	168343004 to 168343015	11	-	TSS region	transcription start site region 14865
Gm38381	1	168348534 to 168350808	2274	-	unclassified gene	predicted gene, 38381
D1Mit15	1	168358674 to 168358833	159		DNA segment	DNA segment, Chr 1, Massachusetts Institute of Technology 15
Nktcn1	1	168358674 to 171804689	3446015		QTL	natural killer T cell numbers 1
Sle1a	1	168358674 to 170239759	1881085		QTL	systematic lupus erythematosus susceptibility 1a
Sluc5	1	168358674 to 168358833	159		QTL	susceptibility to lung cancer 5
Tssr14866	1	168370090 to 168370095	5	-	TSS region	transcription start site region 14866
Tssr14867	1	168395559 to 168395563	4	-	TSS region	transcription start site region 14867
Tssr14868	1	168406276 to 168406279	3	-	TSS region	transcription start site region 14868
4833414E09Rik	1	168419639 to 168420828	1189		unclassified non-coding RNA gene	RIKEN cDNA 4833414E09 gene
Tssr9912	1	168430401 to 168430414	13	+	TSS region	transcription start site region 9912
Tssr14869	1	168431267 to 168431269	2	-	TSS region	transcription start site region 14869
Tssr14870	1	168431502 to 168431513	11	-	TSS region	transcription start site region 14870
Tssr14871	1	168431547 to 168431558	11	-	TSS region	transcription start site region 14871
Tssr14872	1	168431564 to 168431591	27	-	TSS region	transcription start site region 14872
Tssr14873	1	168431599 to 168431638	39	-	TSS region	transcription start site region 14873
Tssr14874	1	168431646 to 168431666	20	-	TSS region	transcription start site region 14874
Tssr14875	1	168431695 to 168431713	18	-	TSS region	transcription start site region 14875
Tssr14876	1	168431860 to 168431884	24	-	TSS region	transcription start site region 14876
Tssr14877	1	168431896 to 168431905	9	-	TSS region	transcription start site region 14877
Tssr14878	1	168431909 to 168431982	73	-	TSS region	transcription start site region 14878
Tssr14879	1	168432111 to 168432125	14	-	TSS region	transcription start site region 14879
Tssr14880	1	168432142 to 168432186	44	-	TSS region	transcription start site region 14880
Tssr14881	1	168432191 to 168432202	11	-	TSS region	transcription start site region 14881
Tssr14882	1	168432204 to 168432225	21	-	TSS region	transcription start site region 14882
Tssr14883	1	168432306 to 168432347	41	-	TSS region	transcription start site region 14883
Cpgi988	1	168432566 to 168432783	217		CpG island	CpG island 988
Tssr274	1	168432573 to 168432578	5	+	TSS region	transcription start site region 274
Gm39696	1	168475634 to 168495913	20279	-	lncRNA gene	predicted gene, 39696