Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Lrnx12 | 1 | 56277741 | QTL | learning-contextual 12 | ||
Ap1q | 1 | 20726192 | QTL | alcohol preference 1 QTL | ||
Nidd3k | 1 | 21961824 | QTL | Nidd3 on KK-A |
||
Hcs7 | 1 | 11584366 | QTL | hepatocarcinogenesis susceptibility 7 | ||
Leusq1 | 1 | 11584366 | QTL | leucocytosis susceptibility QTL 1 | ||
Cpgi981 | 1 | 192 | CpG island | CpG island 981 | ||
Cpgi982 | 1 | 296 | CpG island | CpG island 982 | ||
Cpgi983 | 1 | 315 | CpG island | CpG island 983 | ||
Cpgi984 | 1 | 1982 | CpG island | CpG island 984 | ||
Tssr9906 | 1 | 13 | + | TSS region | transcription start site region 9906 | |
Tssr14859 | 1 | 12 | - | TSS region | transcription start site region 14859 | |
Tssr9907 | 1 | 18 | + | TSS region | transcription start site region 9907 | |
Tssr9908 | 1 | 15 | + | TSS region | transcription start site region 9908 | |
Lmx1a | 1 | 159504 | + | protein coding gene | LIM homeobox transcription factor 1 alpha | |
Tssr14860 | 1 | 9 | - | TSS region | transcription start site region 14860 | |
Tssr9909 | 1 | 9 | + | TSS region | transcription start site region 9909 | |
Tssr9910 | 1 | 11 | + | TSS region | transcription start site region 9910 | |
Tssr9911 | 1 | 28 | + | TSS region | transcription start site region 9911 | |
Cpgi985 | 1 | 583 | CpG island | CpG island 985 | ||
D1Mit110 | 1 | 136 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 110 | ||
Liq1 | 1 | 23734767 | QTL | limb inflammation QTL 1 | ||
Cpgi986 | 1 | 933 | CpG island | CpG island 986 | ||
Skmw12 | 1 | 185 | QTL | skeletal muscle weight 12 | ||
D1Mit16 | 1 | 185 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 16 | ||
Mop3 | 1 | 21642252 | QTL | morphine preference 3 | ||
Cpgi987 | 1 | 314 | CpG island | CpG island 987 | ||
Cfcd | 1 | 1210422 | QTL | contextual fear conditioning | ||
D1Mit370 | 1 | 170 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 370 | ||
Gm20711 | 1 | 118326 | + | antisense lncRNA gene | predicted gene 20711 | |
Pbx1 | 1 | 312900 | - | protein coding gene | pre B cell leukemia homeobox 1 | |
Tssr14861 | 1 | 16 | - | TSS region | transcription start site region 14861 | |
Tssr14862 | 1 | 6 | - | TSS region | transcription start site region 14862 | |
Tssr14863 | 1 | 6 | - | TSS region | transcription start site region 14863 | |
Tssr14864 | 1 | 4 | - | TSS region | transcription start site region 14864 | |
Gm37524 | 1 | 1691 | - | unclassified gene | predicted gene, 37524 | |
Tssr14865 | 1 | 11 | - | TSS region | transcription start site region 14865 | |
Gm38381 | 1 | 2274 | - | unclassified gene | predicted gene, 38381 | |
Sluc5 | 1 | 159 | QTL | susceptibility to lung cancer 5 | ||
D1Mit15 | 1 | 159 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 15 | ||
Nktcn1 | 1 | 3446015 | QTL | natural killer T cell numbers 1 | ||
Sle1a | 1 | 1881085 | QTL | systematic lupus erythematosus susceptibility 1a | ||
Tssr14866 | 1 | 5 | - | TSS region | transcription start site region 14866 | |
Tssr14867 | 1 | 4 | - | TSS region | transcription start site region 14867 | |
Tssr14868 | 1 | 3 | - | TSS region | transcription start site region 14868 | |
4833414E09Rik | 1 | 1189 | unclassified non-coding RNA gene | RIKEN cDNA 4833414E09 gene | ||
Tssr9912 | 1 | 13 | + | TSS region | transcription start site region 9912 | |
Tssr14869 | 1 | 2 | - | TSS region | transcription start site region 14869 | |
Tssr14870 | 1 | 11 | - | TSS region | transcription start site region 14870 | |
Tssr14871 | 1 | 11 | - | TSS region | transcription start site region 14871 | |
Tssr14872 | 1 | 27 | - | TSS region | transcription start site region 14872 | |
Tssr14873 | 1 | 39 | - | TSS region | transcription start site region 14873 | |
Tssr14874 | 1 | 20 | - | TSS region | transcription start site region 14874 | |
Tssr14875 | 1 | 18 | - | TSS region | transcription start site region 14875 | |
Tssr14876 | 1 | 24 | - | TSS region | transcription start site region 14876 | |
Tssr14877 | 1 | 9 | - | TSS region | transcription start site region 14877 | |
Tssr14878 | 1 | 73 | - | TSS region | transcription start site region 14878 | |
Tssr14879 | 1 | 14 | - | TSS region | transcription start site region 14879 | |
Tssr14880 | 1 | 44 | - | TSS region | transcription start site region 14880 | |
Tssr14881 | 1 | 11 | - | TSS region | transcription start site region 14881 | |
Tssr14882 | 1 | 21 | - | TSS region | transcription start site region 14882 | |
Tssr14883 | 1 | 41 | - | TSS region | transcription start site region 14883 | |
Cpgi988 | 1 | 217 | CpG island | CpG island 988 | ||
Tssr274 | 1 | 5 | + | TSS region | transcription start site region 274 | |
Gm39696 | 1 | 20279 | - | lncRNA gene | predicted gene, 39696 | |
Mir6348 | 1 | 119 | + | miRNA gene | microRNA 6348 | |
Tssr9913 | 1 | 9 | + | TSS region | transcription start site region 9913 | |
Tssr275 | 1 | 22 | - | TSS region | transcription start site region 275 | |
Gm34320 | 1 | 70051 | - | lncRNA gene | predicted gene, 34320 | |
1700063I16Rik | 1 | 610 | - | unclassified gene | RIKEN cDNA 1700063I16 gene | |
Tssr14884 | 1 | 10 | - | TSS region | transcription start site region 14884 | |
Tssr14885 | 1 | 12 | - | TSS region | transcription start site region 14885 | |
Tssr14886 | 1 | 13 | - | TSS region | transcription start site region 14886 | |
D1Mit540.1 | 1 | 145 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 540.1 | ||
D1Mit540 | 1 | 124 | DNA segment | DNA Segment, Chr 1, Massachusetts Institute of Technology 540 | ||
Tssr14887 | 1 | 7 | - | TSS region | transcription start site region 14887 | |
D1Mit114 | 1 | 143 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 114 | ||
D1Mit112 | 1 | 177 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 112 | ||
Bmd5b | 1 | 2930524 | QTL | bone mineral density 5b | ||
D1Mit111 | 1 | 169 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 111 | ||
Nba2 | 1 | 169 | QTL | New Zealand Black autoimmunity 2 | ||
Mir6354 | 1 | 115 | - | miRNA gene | microRNA 6354 | |
Tssr14888 | 1 | 9 | - | TSS region | transcription start site region 14888 | |
Tssr14889 | 1 | 5 | - | TSS region | transcription start site region 14889 | |
Tssr14890 | 1 | 2 | - | TSS region | transcription start site region 14890 | |
Gm39697 | 1 | 44651 | - | lncRNA gene | predicted gene, 39697 | |
Cgnz1 | 1 | 172 | QTL | chronic glomerulonephritis in NZM 1 | ||
Bbaa30 | 1 | 5417698 | QTL | B.burgdorferi-associated arthritis 30 | ||
Cfmq1 | 1 | 172 | QTL | cystic fibrosis modifier QTL 1 | ||
Lprq3 | 1 | 172 | QTL | lipoprotein QTL 3 | ||
D1Mit36 | 1 | 172 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 36 | ||
Lbw7 | 1 | 172 | QTL | lupus NZB x NZW 7 | ||
Sle16 | 1 | 8338849 | QTL | systematic lupus erythematosus susceptibility 16 | ||
Sle1 | 1 | 172 | QTL | systemic lupus erythmatosus susceptibility 1 | ||
D1Mit402 | 1 | 103 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 402 | ||
Gm34421 | 1 | 6266 | + | lncRNA gene | predicted gene, 34421 | |
Hdlq107 | 1 | 0 | QTL | HDL QTL 107 | ||
Ewc1 | 1 | 0 | QTL | ethanol withdrawal and consumption 1 | ||
Tcq11 | 1 | 10510000 | QTL | total cholesterol QTL 11 | ||
Gm37839 | 1 | 19103 | - | lincRNA gene | predicted gene, 37839 | |
Gm34477 | 1 | 5774 | + | lncRNA gene | predicted gene, 34477 | |
Gm5265 | 1 | 341 | - | pseudogene | predicted pseudogene 5265 | |
Gm34535 | 1 | 7789 | + | lncRNA gene | predicted gene, 34535 | |
Nuf2 | 1 | 33530 | - | protein coding gene | NUF2, NDC80 kinetochore complex component | |
Cpgi989 | 1 | 508 | CpG island | CpG island 989 | ||
Tssr14891 | 1 | 94 | - | TSS region | transcription start site region 14891 | |
Tssr14892 | 1 | 13 | - | TSS region | transcription start site region 14892 | |
Gm34624 | 1 | 10941 | + | lncRNA gene | predicted gene, 34624 | |
Gm18900 | 1 | 583 | - | pseudogene | predicted gene, 18900 | |
Gm36980 | 1 | 1155 | - | pseudogene | predicted gene, 36980 | |
Tssr9914 | 1 | 15 | + | TSS region | transcription start site region 9914 | |
Rgs5 | 1 | 40312 | + | protein coding gene | regulator of G-protein signaling 5 | |
Tssr9915 | 1 | 5 | + | TSS region | transcription start site region 9915 | |
Tssr9916 | 1 | 29 | + | TSS region | transcription start site region 9916 | |
Tssr9917 | 1 | 20 | + | TSS region | transcription start site region 9917 | |
Tssr276 | 1 | 25 | + | TSS region | transcription start site region 276 | |
Rgs4 | 1 | 6165 | - | protein coding gene | regulator of G-protein signaling 4 | |
Tssr14893 | 1 | 15 | - | TSS region | transcription start site region 14893 | |
Gm39698 | 1 | 8477 | - | lncRNA gene | predicted gene, 39698 | |
Gm22114 | 1 | 106 | - | snRNA gene | predicted gene, 22114 | |
D1Mit524 | 1 | 114 | DNA segment | DNA Segment, Chr 1, Massachusetts Institute of Technology-524 | ||
Gm37586 | 1 | 203 | + | pseudogene | predicted gene, 37586 | |
Gm39699 | 1 | 2559 | + | lncRNA gene | predicted gene, 39699 | |
Ccdc190 | 1 | 6005 | + | protein coding gene | coiled-coil domain containing 190 | |
Tssr9918 | 1 | 8 | + | TSS region | transcription start site region 9918 | |
Tssr277 | 1 | 42 | + | TSS region | transcription start site region 277 | |
Gm15852 | 1 | 1550 | - | unclassified non-coding RNA gene | predicted gene 15852 | |
Hsd17b7 | 1 | 19705 | - | protein coding gene | hydroxysteroid (17-beta) dehydrogenase 7 | |
Cpgi990 | 1 | 636 | CpG island | CpG island 990 | ||
Tssr14894 | 1 | 75 | - | TSS region | transcription start site region 14894 | |
3110045C21Rik | 1 | 2987 | + | antisense lncRNA gene | RIKEN cDNA 3110045C21 gene | |
Tssr9919 | 1 | 26 | + | TSS region | transcription start site region 9919 | |
Tssr9920 | 1 | 8 | + | TSS region | transcription start site region 9920 | |
Ddr2 | 1 | 138455 | - | protein coding gene | discoidin domain receptor family, member 2 | |
Tssr14895 | 1 | 14 | - | TSS region | transcription start site region 14895 | |
Tssr14896 | 1 | 13 | - | TSS region | transcription start site region 14896 | |
Tssr278 | 1 | 2 | + | TSS region | transcription start site region 278 | |
Tssr14897 | 1 | 17 | - | TSS region | transcription start site region 14897 | |
Tssr14898 | 1 | 15 | - | TSS region | transcription start site region 14898 | |
Tssr14899 | 1 | 39 | - | TSS region | transcription start site region 14899 | |
Tssr14900 | 1 | 41 | - | TSS region | transcription start site region 14900 | |
Tssr14901 | 1 | 6 | - | TSS region | transcription start site region 14901 | |
Tssr14902 | 1 | 79 | - | TSS region | transcription start site region 14902 | |
Tssr14903 | 1 | 5 | - | TSS region | transcription start site region 14903 | |
Tssr279 | 1 | 16 | - | TSS region | transcription start site region 279 | |
Tssr14904 | 1 | 37 | - | TSS region | transcription start site region 14904 | |
Tssr14905 | 1 | 11 | - | TSS region | transcription start site region 14905 | |
Uap1 | 1 | 33019 | - | protein coding gene | UDP-N-acetylglucosamine pyrophosphorylase 1 | |
Cpgi991 | 1 | 1309 | CpG island | CpG island 991 | ||
Tssr14906 | 1 | 15 | - | TSS region | transcription start site region 14906 | |
Tssr14907 | 1 | 11 | - | TSS region | transcription start site region 14907 | |
Tssr14908 | 1 | 15 | - | TSS region | transcription start site region 14908 | |
Tssr14909 | 1 | 51 | - | TSS region | transcription start site region 14909 | |
Tssr14910 | 1 | 42 | - | TSS region | transcription start site region 14910 | |
Gm37748 | 1 | 1139 | + | lincRNA gene | predicted gene, 37748 | |
Gm37502 | 1 | 2390 | - | lincRNA gene | predicted gene, 37502 | |
Tssr14911 | 1 | 24 | - | TSS region | transcription start site region 14911 | |
Uhmk1 | 1 | 16179 | - | protein coding gene | U2AF homology motif (UHM) kinase 1 | |
Tssr14912 | 1 | 3 | - | TSS region | transcription start site region 14912 | |
Tssr14913 | 1 | 7 | - | TSS region | transcription start site region 14913 | |
Tssr14914 | 1 | 6 | - | TSS region | transcription start site region 14914 | |
Cpgi992 | 1 | 749 | CpG island | CpG island 992 | ||
Tssr9921 | 1 | 37 | + | TSS region | transcription start site region 9921 | |
4930500M09Rik | 1 | 1562 | + | antisense lncRNA gene | RIKEN cDNA 4930500M09 gene | |
Tssr14915 | 1 | 40 | - | TSS region | transcription start site region 14915 | |
Sh2d1b2 | 1 | 18716 | + | protein coding gene | SH2 domain containing 1B2 | |
D1Mit353 | 1 | 113 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 353 | ||
D1Mit508 | 1 | 247 | DNA segment | DNA Segment, Chr 1 Massachusetts Institute of Technology 508 | ||
Gm6345 | 1 | 1690 | - | pseudogene | predicted gene 6345 | |
Cpgi993 | 1 | 772 | CpG island | CpG island 993 | ||
Tssr14916 | 1 | 40 | - | TSS region | transcription start site region 14916 | |
Sh2d1b1 | 1 | 8338 | + | protein coding gene | SH2 domain containing 1B1 |