Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:16751937-17241940

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm29649 1 16758205 to 16758623 418 - pseudogene predicted gene 29649
Gm5828 1 16768279 to 16770138 1859 - pseudogene predicted gene 5828
Tssr11055 1 16770149 to 16770159 10 - TSS region transcription start site region 11055
Tssr6013 1 16814249 to 16814256 7 + TSS region transcription start site region 6013
Tssr6014 1 16814297 to 16814304 7 + TSS region transcription start site region 6014
Gm28376 1 16898185 to 17091631 193446 + antisense lncRNA gene predicted gene 28376
4921511E07Rik 1 16930970 to 16931796 826 + unclassified gene RIKEN cDNA 4921511E07 gene
Jph1 1 16964560 to 17097889 133329 - protein coding gene junctophilin 1
Tssr11056 1 16996937 to 16996940 3 - TSS region transcription start site region 11056
Tssr11057 1 17015452 to 17015456 4 - TSS region transcription start site region 11057
Tssr11058 1 17082458 to 17082462 4 - TSS region transcription start site region 11058
Cpgi59 1 17091546 to 17092089 543 CpG island CpG island 59
Cpgi60 1 17096653 to 17098194 1541 CpG island CpG island 60
Tssr11059 1 17097708 to 17097713 5 - TSS region transcription start site region 11059
Tssr15 1 17097749 to 17097753 4 - TSS region transcription start site region 15
Tssr11060 1 17097798 to 17097806 8 - TSS region transcription start site region 11060
Tssr11061 1 17097839 to 17097872 33 - TSS region transcription start site region 11061
Gm46085 1 17097969 to 17100793 2824 + lncRNA gene predicted gene, 46085
Tssr6015 1 17098090 to 17098130 40 + TSS region transcription start site region 6015
Gm31982 1 17098573 to 17124568 25995 - lncRNA gene predicted gene, 31982
Gm28783 1 17124747 to 17128956 4209 + lincRNA gene predicted gene 28783
Cpgi61 1 17145342 to 17145799 457 CpG island CpG island 61
Tssr6016 1 17145357 to 17145431 74 + TSS region transcription start site region 6016
Gdap1 1 17145373 to 17164271 18898 + protein coding gene ganglioside-induced differentiation-associated-protein 1
Gm28784 1 17168403 to 17173103 4700 + lincRNA gene predicted gene 28784
Gm39597 1 17202970 to 17205577 2607 + lncRNA gene predicted gene, 39597