Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:167498384-167739623

28 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr9896	1	167562828 to 167562837	9	+	TSS region	transcription start site region 9896
Cpgi978	1	167598280 to 167598973	693		CpG island	CpG island 978
Tssr9897	1	167598302 to 167598325	23	+	TSS region	transcription start site region 9897
Tssr9898	1	167598326 to 167598351	25	+	TSS region	transcription start site region 9898
Tssr9899	1	167598360 to 167598374	14	+	TSS region	transcription start site region 9899
Rxrg	1	167598384 to 167639623	41239	+	protein coding gene	retinoid X receptor gamma
Tssr9900	1	167598389 to 167598411	22	+	TSS region	transcription start site region 9900
Tssr9901	1	167598420 to 167598438	18	+	TSS region	transcription start site region 9901
Tssr9902	1	167598450 to 167598476	26	+	TSS region	transcription start site region 9902
Tssr9903	1	167598589 to 167598618	29	+	TSS region	transcription start site region 9903
Tssr9904	1	167598692 to 167598729	37	+	TSS region	transcription start site region 9904
Cpgi979	1	167618165 to 167618562	397		CpG island	CpG island 979
Tssr9905	1	167618246 to 167618299	53	+	TSS region	transcription start site region 9905
Cpgi980	1	167632208 to 167632718	510		CpG island	CpG island 980
Cpgi981	1	167660550 to 167660742	192		CpG island	CpG island 981
Cpgi982	1	167661173 to 167661469	296		CpG island	CpG island 982
Cpgi983	1	167672704 to 167673019	315		CpG island	CpG island 983
Cpgi984	1	167688216 to 167690198	1982		CpG island	CpG island 984
Tssr9906	1	167688620 to 167688633	13	+	TSS region	transcription start site region 9906
Tssr14859	1	167689037 to 167689049	12	-	TSS region	transcription start site region 14859
Tssr9907	1	167689108 to 167689126	18	+	TSS region	transcription start site region 9907
Tssr9908	1	167689202 to 167689217	15	+	TSS region	transcription start site region 9908
Lmx1a	1	167689237 to 167848741	159504	+	protein coding gene	LIM homeobox transcription factor 1 alpha
Tssr14860	1	167689400 to 167689409	9	-	TSS region	transcription start site region 14860
Tssr9909	1	167689525 to 167689534	9	+	TSS region	transcription start site region 9909
Tssr9910	1	167689552 to 167689563	11	+	TSS region	transcription start site region 9910
Tssr9911	1	167689634 to 167689662	28	+	TSS region	transcription start site region 9911
Cpgi985	1	167691900 to 167692483	583		CpG island	CpG island 985