Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:167308775-167478824

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi972 1 167308204 to 167309122 918 CpG island CpG island 972
Tmco1 1 167308670 to 167333978 25308 + protein coding gene transmembrane and coiled-coil domains 1
Tssr9887 1 167308718 to 167308807 89 + TSS region transcription start site region 9887
Tssr9888 1 167308847 to 167308858 11 + TSS region transcription start site region 9888
Tssr14848 1 167331259 to 167331306 47 - TSS region transcription start site region 14848
Tssr14849 1 167331309 to 167331326 17 - TSS region transcription start site region 14849
Tssr9889 1 167331346 to 167331379 33 + TSS region transcription start site region 9889
Cpgi973 1 167340022 to 167340760 738 CpG island CpG island 973
Gm25911 1 167340369 to 167340424 55 - miRNA gene predicted gene, 25911
Tssr14850 1 167340515 to 167340546 31 - TSS region transcription start site region 14850
Gm24182 1 167349025 to 167349131 106 + snRNA gene predicted gene, 24182
Cpgi974 1 167349869 to 167350655 786 CpG island CpG island 974
Tssr9890 1 167349976 to 167350065 89 + TSS region transcription start site region 9890
Aldh9a1 1 167349991 to 167368530 18539 + protein coding gene aldehyde dehydrogenase 9, subfamily A1
Tssr9891 1 167350151 to 167350162 11 + TSS region transcription start site region 9891
Tssr9892 1 167350165 to 167350170 5 + TSS region transcription start site region 9892
Tssr9893 1 167350184 to 167350234 50 + TSS region transcription start site region 9893
Tssr9894 1 167350246 to 167350249 3 + TSS region transcription start site region 9894
Tssr9895 1 167350276 to 167350285 9 + TSS region transcription start site region 9895
Tssr14851 1 167350360 to 167350370 10 - TSS region transcription start site region 14851
Mgst3 1 167372384 to 167393797 21413 - protein coding gene microsomal glutathione S-transferase 3
Tssr14852 1 167372417 to 167372422 5 - TSS region transcription start site region 14852
Tssr14853 1 167373521 to 167373525 4 - TSS region transcription start site region 14853
Tssr14854 1 167374541 to 167374573 32 - TSS region transcription start site region 14854
Cpgi975 1 167393581 to 167393883 302 CpG island CpG island 975
Tssr14855 1 167393775 to 167393824 49 - TSS region transcription start site region 14855
Tssr14856 1 167393826 to 167393835 9 - TSS region transcription start site region 14856
Cpgi976 1 167393950 to 167394304 354 CpG island CpG island 976
Gm34207 1 167423356 to 167455198 31842 + lncRNA gene predicted gene, 34207
Lrrc52 1 167445675 to 167466780 21105 - protein coding gene leucine rich repeat containing 52
Cpgi977 1 167445842 to 167446106 264 CpG island CpG island 977
Tssr14857 1 167466979 to 167466987 8 - TSS region transcription start site region 14857
Tssr14858 1 167467012 to 167467024 12 - TSS region transcription start site region 14858
D1Mit109 1 167468543 to 167468738 195 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 109