Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Lrnx12 | 1 | 56277741 | QTL | learning-contextual 12 | ||
Ap1q | 1 | 20726192 | QTL | alcohol preference 1 QTL | ||
Nidd3k | 1 | 21961824 | QTL | Nidd3 on KK-A |
||
Hcs7 | 1 | 11584366 | QTL | hepatocarcinogenesis susceptibility 7 | ||
Leusq1 | 1 | 11584366 | QTL | leucocytosis susceptibility QTL 1 | ||
Uck2 | 1 | 62437 | - | protein coding gene | uridine-cytidine kinase 2 | |
Tssr14829 | 1 | 21 | - | TSS region | transcription start site region 14829 | |
Tssr14830 | 1 | 31 | - | TSS region | transcription start site region 14830 | |
Tssr14831 | 1 | 12 | - | TSS region | transcription start site region 14831 | |
Tssr9884 | 1 | 14 | + | TSS region | transcription start site region 9884 | |
Gm37982 | 1 | 9035 | + | antisense lncRNA gene | predicted gene, 37982 | |
Tssr14832 | 1 | 35 | - | TSS region | transcription start site region 14832 | |
Tssr14833 | 1 | 1 | - | TSS region | transcription start site region 14833 | |
Tssr14834 | 1 | 9 | - | TSS region | transcription start site region 14834 | |
Tssr14835 | 1 | 3 | - | TSS region | transcription start site region 14835 | |
Gm46170 | 1 | 672 | + | lncRNA gene | predicted gene, 46170 | |
Tssr14836 | 1 | 11 | - | TSS region | transcription start site region 14836 | |
D1Mit400 | 1 | 148 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 400 | ||
Tssr14837 | 1 | 18 | - | TSS region | transcription start site region 14837 | |
Cpgi971 | 1 | 2059 | CpG island | CpG island 971 | ||
Tssr14838 | 1 | 11 | - | TSS region | transcription start site region 14838 | |
Tssr9885 | 1 | 10 | + | TSS region | transcription start site region 9885 | |
Tssr14839 | 1 | 13 | - | TSS region | transcription start site region 14839 | |
Tssr14840 | 1 | 9 | - | TSS region | transcription start site region 14840 | |
Tssr14841 | 1 | 13 | - | TSS region | transcription start site region 14841 | |
Tssr271 | 1 | 9 | - | TSS region | transcription start site region 271 | |
Tssr14842 | 1 | 18 | - | TSS region | transcription start site region 14842 | |
Tssr14843 | 1 | 24 | - | TSS region | transcription start site region 14843 | |
Tssr14844 | 1 | 12 | - | TSS region | transcription start site region 14844 | |
Tssr14845 | 1 | 11 | - | TSS region | transcription start site region 14845 | |
Tssr14846 | 1 | 11 | - | TSS region | transcription start site region 14846 | |
Gm2453 | 1 | 755 | + | lincRNA gene | predicted gene 2453 | |
Tssr272 | 1 | 15 | - | TSS region | transcription start site region 272 | |
Mir6347 | 1 | 100 | + | miRNA gene | microRNA 6347 | |
D1Mit145 | 1 | 138 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 145 | ||
Gm37232 | 1 | 366 | - | pseudogene | predicted gene, 37232 | |
Cpgi972 | 1 | 918 | CpG island | CpG island 972 | ||
Tssr273 | 1 | 47 | + | TSS region | transcription start site region 273 | |
Tssr14847 | 1 | 31 | - | TSS region | transcription start site region 14847 | |
Tssr9886 | 1 | 21 | + | TSS region | transcription start site region 9886 | |
Tmco1 | 1 | 25308 | + | protein coding gene | transmembrane and coiled-coil domains 1 | |
Tssr9887 | 1 | 89 | + | TSS region | transcription start site region 9887 | |
Tssr9888 | 1 | 11 | + | TSS region | transcription start site region 9888 | |
Tssr14848 | 1 | 47 | - | TSS region | transcription start site region 14848 | |
Tssr14849 | 1 | 17 | - | TSS region | transcription start site region 14849 | |
Tssr9889 | 1 | 33 | + | TSS region | transcription start site region 9889 | |
Cpgi973 | 1 | 738 | CpG island | CpG island 973 | ||
Gm25911 | 1 | 55 | - | miRNA gene | predicted gene, 25911 | |
Tssr14850 | 1 | 31 | - | TSS region | transcription start site region 14850 | |
Gm24182 | 1 | 106 | + | snRNA gene | predicted gene, 24182 | |
Cpgi974 | 1 | 786 | CpG island | CpG island 974 | ||
Tssr9890 | 1 | 89 | + | TSS region | transcription start site region 9890 | |
Aldh9a1 | 1 | 18539 | + | protein coding gene | aldehyde dehydrogenase 9, subfamily A1 | |
Tssr9891 | 1 | 11 | + | TSS region | transcription start site region 9891 | |
Tssr9892 | 1 | 5 | + | TSS region | transcription start site region 9892 | |
Tssr9893 | 1 | 50 | + | TSS region | transcription start site region 9893 | |
Tssr9894 | 1 | 3 | + | TSS region | transcription start site region 9894 | |
Tssr9895 | 1 | 9 | + | TSS region | transcription start site region 9895 | |
Tssr14851 | 1 | 10 | - | TSS region | transcription start site region 14851 | |
Mgst3 | 1 | 21413 | - | protein coding gene | microsomal glutathione S-transferase 3 | |
Tssr14852 | 1 | 5 | - | TSS region | transcription start site region 14852 | |
Tssr14853 | 1 | 4 | - | TSS region | transcription start site region 14853 | |
Tssr14854 | 1 | 32 | - | TSS region | transcription start site region 14854 | |
Cpgi975 | 1 | 302 | CpG island | CpG island 975 | ||
Tssr14855 | 1 | 49 | - | TSS region | transcription start site region 14855 | |
Tssr14856 | 1 | 9 | - | TSS region | transcription start site region 14856 | |
Cpgi976 | 1 | 354 | CpG island | CpG island 976 | ||
Gm34207 | 1 | 31842 | + | lncRNA gene | predicted gene, 34207 | |
Lrrc52 | 1 | 21105 | - | protein coding gene | leucine rich repeat containing 52 | |
Cpgi977 | 1 | 264 | CpG island | CpG island 977 | ||
Tssr14857 | 1 | 8 | - | TSS region | transcription start site region 14857 | |
Tssr14858 | 1 | 12 | - | TSS region | transcription start site region 14858 | |
D1Mit109 | 1 | 195 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 109 | ||
Tssr9896 | 1 | 9 | + | TSS region | transcription start site region 9896 | |
Cpgi978 | 1 | 693 | CpG island | CpG island 978 | ||
Tssr9897 | 1 | 23 | + | TSS region | transcription start site region 9897 | |
Tssr9898 | 1 | 25 | + | TSS region | transcription start site region 9898 | |
Tssr9899 | 1 | 14 | + | TSS region | transcription start site region 9899 | |
Rxrg | 1 | 41239 | + | protein coding gene | retinoid X receptor gamma | |
Tssr9900 | 1 | 22 | + | TSS region | transcription start site region 9900 | |
Tssr9901 | 1 | 18 | + | TSS region | transcription start site region 9901 | |
Tssr9902 | 1 | 26 | + | TSS region | transcription start site region 9902 | |
Tssr9903 | 1 | 29 | + | TSS region | transcription start site region 9903 | |
Tssr9904 | 1 | 37 | + | TSS region | transcription start site region 9904 | |
Cpgi979 | 1 | 397 | CpG island | CpG island 979 | ||
Tssr9905 | 1 | 53 | + | TSS region | transcription start site region 9905 | |
Cpgi980 | 1 | 510 | CpG island | CpG island 980 | ||
Cpgi981 | 1 | 192 | CpG island | CpG island 981 | ||
Cpgi982 | 1 | 296 | CpG island | CpG island 982 | ||
Cpgi983 | 1 | 315 | CpG island | CpG island 983 | ||
Cpgi984 | 1 | 1982 | CpG island | CpG island 984 | ||
Tssr9906 | 1 | 13 | + | TSS region | transcription start site region 9906 | |
Tssr14859 | 1 | 12 | - | TSS region | transcription start site region 14859 | |
Tssr9907 | 1 | 18 | + | TSS region | transcription start site region 9907 | |
Tssr9908 | 1 | 15 | + | TSS region | transcription start site region 9908 | |
Lmx1a | 1 | 159504 | + | protein coding gene | LIM homeobox transcription factor 1 alpha | |
Tssr14860 | 1 | 9 | - | TSS region | transcription start site region 14860 | |
Tssr9909 | 1 | 9 | + | TSS region | transcription start site region 9909 | |
Tssr9910 | 1 | 11 | + | TSS region | transcription start site region 9910 | |
Tssr9911 | 1 | 28 | + | TSS region | transcription start site region 9911 | |
Cpgi985 | 1 | 583 | CpG island | CpG island 985 | ||
D1Mit110 | 1 | 136 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 110 | ||
Liq1 | 1 | 23734767 | QTL | limb inflammation QTL 1 | ||
Cpgi986 | 1 | 933 | CpG island | CpG island 986 | ||
D1Mit16 | 1 | 185 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 16 | ||
Skmw12 | 1 | 185 | QTL | skeletal muscle weight 12 | ||
Mop3 | 1 | 21642252 | QTL | morphine preference 3 | ||
Cpgi987 | 1 | 314 | CpG island | CpG island 987 | ||
D1Mit370 | 1 | 170 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 370 | ||
Cfcd | 1 | 1210422 | QTL | contextual fear conditioning | ||
Gm20711 | 1 | 118326 | + | antisense lncRNA gene | predicted gene 20711 | |
Pbx1 | 1 | 312900 | - | protein coding gene | pre B cell leukemia homeobox 1 | |
Tssr14861 | 1 | 16 | - | TSS region | transcription start site region 14861 | |
Tssr14862 | 1 | 6 | - | TSS region | transcription start site region 14862 | |
Tssr14863 | 1 | 6 | - | TSS region | transcription start site region 14863 | |
Tssr14864 | 1 | 4 | - | TSS region | transcription start site region 14864 | |
Gm37524 | 1 | 1691 | - | unclassified gene | predicted gene, 37524 | |
Tssr14865 | 1 | 11 | - | TSS region | transcription start site region 14865 | |
Gm38381 | 1 | 2274 | - | unclassified gene | predicted gene, 38381 | |
Sluc5 | 1 | 159 | QTL | susceptibility to lung cancer 5 | ||
Sle1a | 1 | 1881085 | QTL | systematic lupus erythematosus susceptibility 1a | ||
D1Mit15 | 1 | 159 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 15 | ||
Nktcn1 | 1 | 3446015 | QTL | natural killer T cell numbers 1 | ||
Tssr14866 | 1 | 5 | - | TSS region | transcription start site region 14866 | |
Tssr14867 | 1 | 4 | - | TSS region | transcription start site region 14867 | |
Tssr14868 | 1 | 3 | - | TSS region | transcription start site region 14868 | |
4833414E09Rik | 1 | 1189 | unclassified non-coding RNA gene | RIKEN cDNA 4833414E09 gene | ||
Tssr9912 | 1 | 13 | + | TSS region | transcription start site region 9912 | |
Tssr14869 | 1 | 2 | - | TSS region | transcription start site region 14869 | |
Tssr14870 | 1 | 11 | - | TSS region | transcription start site region 14870 | |
Tssr14871 | 1 | 11 | - | TSS region | transcription start site region 14871 | |
Tssr14872 | 1 | 27 | - | TSS region | transcription start site region 14872 | |
Tssr14873 | 1 | 39 | - | TSS region | transcription start site region 14873 | |
Tssr14874 | 1 | 20 | - | TSS region | transcription start site region 14874 | |
Tssr14875 | 1 | 18 | - | TSS region | transcription start site region 14875 | |
Tssr14876 | 1 | 24 | - | TSS region | transcription start site region 14876 | |
Tssr14877 | 1 | 9 | - | TSS region | transcription start site region 14877 | |
Tssr14878 | 1 | 73 | - | TSS region | transcription start site region 14878 | |
Tssr14879 | 1 | 14 | - | TSS region | transcription start site region 14879 | |
Tssr14880 | 1 | 44 | - | TSS region | transcription start site region 14880 | |
Tssr14881 | 1 | 11 | - | TSS region | transcription start site region 14881 | |
Tssr14882 | 1 | 21 | - | TSS region | transcription start site region 14882 | |
Tssr14883 | 1 | 41 | - | TSS region | transcription start site region 14883 | |
Cpgi988 | 1 | 217 | CpG island | CpG island 988 | ||
Tssr274 | 1 | 5 | + | TSS region | transcription start site region 274 | |
Gm39696 | 1 | 20279 | - | lncRNA gene | predicted gene, 39696 | |
Mir6348 | 1 | 119 | + | miRNA gene | microRNA 6348 | |
Tssr9913 | 1 | 9 | + | TSS region | transcription start site region 9913 | |
Tssr275 | 1 | 22 | - | TSS region | transcription start site region 275 | |
Gm34320 | 1 | 70051 | - | lncRNA gene | predicted gene, 34320 | |
1700063I16Rik | 1 | 610 | - | unclassified gene | RIKEN cDNA 1700063I16 gene | |
Tssr14884 | 1 | 10 | - | TSS region | transcription start site region 14884 | |
Tssr14885 | 1 | 12 | - | TSS region | transcription start site region 14885 | |
Tssr14886 | 1 | 13 | - | TSS region | transcription start site region 14886 | |
D1Mit540.1 | 1 | 145 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 540.1 | ||
D1Mit540 | 1 | 124 | DNA segment | DNA Segment, Chr 1, Massachusetts Institute of Technology 540 | ||
Tssr14887 | 1 | 7 | - | TSS region | transcription start site region 14887 | |
D1Mit114 | 1 | 143 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 114 | ||
D1Mit112 | 1 | 177 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 112 | ||
D1Mit111 | 1 | 169 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 111 | ||
Bmd5b | 1 | 2930524 | QTL | bone mineral density 5b | ||
Nba2 | 1 | 169 | QTL | New Zealand Black autoimmunity 2 | ||
Mir6354 | 1 | 115 | - | miRNA gene | microRNA 6354 | |
Tssr14888 | 1 | 9 | - | TSS region | transcription start site region 14888 | |
Tssr14889 | 1 | 5 | - | TSS region | transcription start site region 14889 | |
Tssr14890 | 1 | 2 | - | TSS region | transcription start site region 14890 | |
Gm39697 | 1 | 44651 | - | lncRNA gene | predicted gene, 39697 | |
Bbaa30 | 1 | 5417698 | QTL | B.burgdorferi-associated arthritis 30 | ||
Cfmq1 | 1 | 172 | QTL | cystic fibrosis modifier QTL 1 | ||
Sle16 | 1 | 8338849 | QTL | systematic lupus erythematosus susceptibility 16 | ||
Sle1 | 1 | 172 | QTL | systemic lupus erythmatosus susceptibility 1 | ||
Cgnz1 | 1 | 172 | QTL | chronic glomerulonephritis in NZM 1 | ||
D1Mit36 | 1 | 172 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 36 | ||
Lprq3 | 1 | 172 | QTL | lipoprotein QTL 3 | ||
Lbw7 | 1 | 172 | QTL | lupus NZB x NZW 7 | ||
D1Mit402 | 1 | 103 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 402 | ||
Gm34421 | 1 | 6266 | + | lncRNA gene | predicted gene, 34421 | |
Ewc1 | 1 | 0 | QTL | ethanol withdrawal and consumption 1 | ||
Hdlq107 | 1 | 0 | QTL | HDL QTL 107 | ||
Tcq11 | 1 | 10510000 | QTL | total cholesterol QTL 11 | ||
Gm37839 | 1 | 19103 | - | lincRNA gene | predicted gene, 37839 | |
Gm34477 | 1 | 5774 | + | lncRNA gene | predicted gene, 34477 | |
Gm5265 | 1 | 341 | - | pseudogene | predicted pseudogene 5265 | |
Gm34535 | 1 | 7789 | + | lncRNA gene | predicted gene, 34535 | |
Nuf2 | 1 | 33530 | - | protein coding gene | NUF2, NDC80 kinetochore complex component | |
Cpgi989 | 1 | 508 | CpG island | CpG island 989 | ||
Tssr14891 | 1 | 94 | - | TSS region | transcription start site region 14891 | |
Tssr14892 | 1 | 13 | - | TSS region | transcription start site region 14892 | |
Gm34624 | 1 | 10941 | + | lncRNA gene | predicted gene, 34624 | |
Gm18900 | 1 | 583 | - | pseudogene | predicted gene, 18900 | |
Gm36980 | 1 | 1155 | - | pseudogene | predicted gene, 36980 |