Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Lrnx12 | 1 | 56277741 | QTL | learning-contextual 12 | ||
Ap1q | 1 | 20726192 | QTL | alcohol preference 1 QTL | ||
Hcs7 | 1 | 11584366 | QTL | hepatocarcinogenesis susceptibility 7 | ||
Leusq1 | 1 | 11584366 | QTL | leucocytosis susceptibility QTL 1 | ||
Tssr9876 | 1 | 10 | + | TSS region | transcription start site region 9876 | |
Gm4954 | 1 | 8340 | + | pseudogene | predicted gene 4954 | |
Gm37904 | 1 | 311 | - | pseudogene | predicted gene, 37904 | |
Gm33404 | 1 | 12971 | + | lncRNA gene | predicted gene, 33404 | |
Gm6286 | 1 | 761 | - | pseudogene | predicted gene 6286 | |
Tssr14827 | 1 | 1 | - | TSS region | transcription start site region 14827 | |
Gm46169 | 1 | 14228 | - | lncRNA gene | predicted gene, 46169 | |
Gm16701 | 1 | 25707 | - | lincRNA gene | predicted gene, 16701 | |
Cpgi970 | 1 | 2242 | CpG island | CpG island 970 | ||
Tssr9877 | 1 | 22 | + | TSS region | transcription start site region 9877 | |
Tssr9878 | 1 | 45 | + | TSS region | transcription start site region 9878 | |
Tssr9879 | 1 | 32 | + | TSS region | transcription start site region 9879 | |
Fam78b | 1 | 89885 | + | protein coding gene | family with sequence similarity 78, member B | |
Tssr9880 | 1 | 12 | + | TSS region | transcription start site region 9880 | |
Tssr9881 | 1 | 16 | + | TSS region | transcription start site region 9881 | |
Tssr9882 | 1 | 14 | + | TSS region | transcription start site region 9882 | |
Gm33610 | 1 | 25620 | - | lncRNA gene | predicted gene, 33610 | |
D1Mit351 | 1 | 197 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 351 | ||
Tssr9883 | 1 | 3 | + | TSS region | transcription start site region 9883 | |
Gm33668 | 1 | 4461 | - | lncRNA gene | predicted gene, 33668 | |
Gm17868 | 1 | 667 | + | pseudogene | predicted gene, 17868 | |
Gm37994 | 1 | 408 | - | pseudogene | predicted gene, 37994 | |
Uck2 | 1 | 62437 | - | protein coding gene | uridine-cytidine kinase 2 | |
Tssr14828 | 1 | 20 | - | TSS region | transcription start site region 14828 | |
Tssr14829 | 1 | 21 | - | TSS region | transcription start site region 14829 | |
Tssr14830 | 1 | 31 | - | TSS region | transcription start site region 14830 | |
Tssr14831 | 1 | 12 | - | TSS region | transcription start site region 14831 | |
Tssr9884 | 1 | 14 | + | TSS region | transcription start site region 9884 | |
Gm37982 | 1 | 9035 | + | antisense lncRNA gene | predicted gene, 37982 | |
Tssr14832 | 1 | 35 | - | TSS region | transcription start site region 14832 | |
Tssr14833 | 1 | 1 | - | TSS region | transcription start site region 14833 | |
Tssr14834 | 1 | 9 | - | TSS region | transcription start site region 14834 | |
Tssr14835 | 1 | 3 | - | TSS region | transcription start site region 14835 | |
Gm46170 | 1 | 672 | + | lncRNA gene | predicted gene, 46170 | |
Tssr14836 | 1 | 11 | - | TSS region | transcription start site region 14836 | |
D1Mit400 | 1 | 148 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 400 | ||
Tssr14837 | 1 | 18 | - | TSS region | transcription start site region 14837 | |
Cpgi971 | 1 | 2059 | CpG island | CpG island 971 | ||
Tssr14838 | 1 | 11 | - | TSS region | transcription start site region 14838 | |
Tssr9885 | 1 | 10 | + | TSS region | transcription start site region 9885 | |
Tssr14839 | 1 | 13 | - | TSS region | transcription start site region 14839 | |
Tssr14840 | 1 | 9 | - | TSS region | transcription start site region 14840 | |
Tssr14841 | 1 | 13 | - | TSS region | transcription start site region 14841 | |
Tssr271 | 1 | 9 | - | TSS region | transcription start site region 271 | |
Tssr14842 | 1 | 18 | - | TSS region | transcription start site region 14842 | |
Tssr14843 | 1 | 24 | - | TSS region | transcription start site region 14843 | |
Tssr14844 | 1 | 12 | - | TSS region | transcription start site region 14844 | |
Tssr14845 | 1 | 11 | - | TSS region | transcription start site region 14845 | |
Tssr14846 | 1 | 11 | - | TSS region | transcription start site region 14846 | |
Gm2453 | 1 | 755 | + | lincRNA gene | predicted gene 2453 | |
Tssr272 | 1 | 15 | - | TSS region | transcription start site region 272 | |
Mir6347 | 1 | 100 | + | miRNA gene | microRNA 6347 | |
D1Mit145 | 1 | 138 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 145 | ||
Gm37232 | 1 | 366 | - | pseudogene | predicted gene, 37232 | |
Cpgi972 | 1 | 918 | CpG island | CpG island 972 | ||
Tssr273 | 1 | 47 | + | TSS region | transcription start site region 273 | |
Tssr14847 | 1 | 31 | - | TSS region | transcription start site region 14847 | |
Tssr9886 | 1 | 21 | + | TSS region | transcription start site region 9886 | |
Tmco1 | 1 | 25308 | + | protein coding gene | transmembrane and coiled-coil domains 1 | |
Tssr9887 | 1 | 89 | + | TSS region | transcription start site region 9887 | |
Tssr9888 | 1 | 11 | + | TSS region | transcription start site region 9888 | |
Tssr14848 | 1 | 47 | - | TSS region | transcription start site region 14848 | |
Tssr14849 | 1 | 17 | - | TSS region | transcription start site region 14849 | |
Tssr9889 | 1 | 33 | + | TSS region | transcription start site region 9889 | |
Cpgi973 | 1 | 738 | CpG island | CpG island 973 | ||
Gm25911 | 1 | 55 | - | miRNA gene | predicted gene, 25911 | |
Tssr14850 | 1 | 31 | - | TSS region | transcription start site region 14850 | |
Gm24182 | 1 | 106 | + | snRNA gene | predicted gene, 24182 | |
Cpgi974 | 1 | 786 | CpG island | CpG island 974 | ||
Tssr9890 | 1 | 89 | + | TSS region | transcription start site region 9890 | |
Aldh9a1 | 1 | 18539 | + | protein coding gene | aldehyde dehydrogenase 9, subfamily A1 | |
Tssr9891 | 1 | 11 | + | TSS region | transcription start site region 9891 | |
Tssr9892 | 1 | 5 | + | TSS region | transcription start site region 9892 | |
Tssr9893 | 1 | 50 | + | TSS region | transcription start site region 9893 | |
Tssr9894 | 1 | 3 | + | TSS region | transcription start site region 9894 | |
Tssr9895 | 1 | 9 | + | TSS region | transcription start site region 9895 | |
Tssr14851 | 1 | 10 | - | TSS region | transcription start site region 14851 | |
Mgst3 | 1 | 21413 | - | protein coding gene | microsomal glutathione S-transferase 3 | |
Tssr14852 | 1 | 5 | - | TSS region | transcription start site region 14852 | |
Tssr14853 | 1 | 4 | - | TSS region | transcription start site region 14853 | |
Tssr14854 | 1 | 32 | - | TSS region | transcription start site region 14854 | |
Cpgi975 | 1 | 302 | CpG island | CpG island 975 | ||
Tssr14855 | 1 | 49 | - | TSS region | transcription start site region 14855 | |
Tssr14856 | 1 | 9 | - | TSS region | transcription start site region 14856 | |
Cpgi976 | 1 | 354 | CpG island | CpG island 976 | ||
Gm34207 | 1 | 31842 | + | lncRNA gene | predicted gene, 34207 | |
Lrrc52 | 1 | 21105 | - | protein coding gene | leucine rich repeat containing 52 | |
Cpgi977 | 1 | 264 | CpG island | CpG island 977 | ||
Tssr14857 | 1 | 8 | - | TSS region | transcription start site region 14857 | |
Tssr14858 | 1 | 12 | - | TSS region | transcription start site region 14858 | |
D1Mit109 | 1 | 195 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 109 | ||
Tssr9896 | 1 | 9 | + | TSS region | transcription start site region 9896 | |
Cpgi978 | 1 | 693 | CpG island | CpG island 978 | ||
Tssr9897 | 1 | 23 | + | TSS region | transcription start site region 9897 | |
Tssr9898 | 1 | 25 | + | TSS region | transcription start site region 9898 | |
Tssr9899 | 1 | 14 | + | TSS region | transcription start site region 9899 | |
Rxrg | 1 | 41239 | + | protein coding gene | retinoid X receptor gamma | |
Tssr9900 | 1 | 22 | + | TSS region | transcription start site region 9900 | |
Tssr9901 | 1 | 18 | + | TSS region | transcription start site region 9901 | |
Tssr9902 | 1 | 26 | + | TSS region | transcription start site region 9902 | |
Tssr9903 | 1 | 29 | + | TSS region | transcription start site region 9903 | |
Tssr9904 | 1 | 37 | + | TSS region | transcription start site region 9904 | |
Cpgi979 | 1 | 397 | CpG island | CpG island 979 | ||
Tssr9905 | 1 | 53 | + | TSS region | transcription start site region 9905 | |
Cpgi980 | 1 | 510 | CpG island | CpG island 980 | ||
Cpgi981 | 1 | 192 | CpG island | CpG island 981 | ||
Cpgi982 | 1 | 296 | CpG island | CpG island 982 | ||
Cpgi983 | 1 | 315 | CpG island | CpG island 983 | ||
Cpgi984 | 1 | 1982 | CpG island | CpG island 984 | ||
Tssr9906 | 1 | 13 | + | TSS region | transcription start site region 9906 | |
Tssr14859 | 1 | 12 | - | TSS region | transcription start site region 14859 | |
Tssr9907 | 1 | 18 | + | TSS region | transcription start site region 9907 | |
Tssr9908 | 1 | 15 | + | TSS region | transcription start site region 9908 | |
Lmx1a | 1 | 159504 | + | protein coding gene | LIM homeobox transcription factor 1 alpha | |
Tssr14860 | 1 | 9 | - | TSS region | transcription start site region 14860 | |
Tssr9909 | 1 | 9 | + | TSS region | transcription start site region 9909 | |
Tssr9910 | 1 | 11 | + | TSS region | transcription start site region 9910 | |
Tssr9911 | 1 | 28 | + | TSS region | transcription start site region 9911 | |
Cpgi985 | 1 | 583 | CpG island | CpG island 985 | ||
Liq1 | 1 | 23734767 | QTL | limb inflammation QTL 1 | ||
D1Mit110 | 1 | 136 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 110 | ||
Cpgi986 | 1 | 933 | CpG island | CpG island 986 | ||
D1Mit16 | 1 | 185 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 16 | ||
Skmw12 | 1 | 185 | QTL | skeletal muscle weight 12 | ||
Mop3 | 1 | 21642252 | QTL | morphine preference 3 | ||
Cpgi987 | 1 | 314 | CpG island | CpG island 987 | ||
Cfcd | 1 | 1210422 | QTL | contextual fear conditioning | ||
D1Mit370 | 1 | 170 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 370 | ||
Gm20711 | 1 | 118326 | + | antisense lncRNA gene | predicted gene 20711 | |
Pbx1 | 1 | 312900 | - | protein coding gene | pre B cell leukemia homeobox 1 | |
Tssr14861 | 1 | 16 | - | TSS region | transcription start site region 14861 | |
Tssr14862 | 1 | 6 | - | TSS region | transcription start site region 14862 | |
Tssr14863 | 1 | 6 | - | TSS region | transcription start site region 14863 | |
Tssr14864 | 1 | 4 | - | TSS region | transcription start site region 14864 | |
Gm37524 | 1 | 1691 | - | unclassified gene | predicted gene, 37524 | |
Tssr14865 | 1 | 11 | - | TSS region | transcription start site region 14865 | |
Gm38381 | 1 | 2274 | - | unclassified gene | predicted gene, 38381 | |
Sle1a | 1 | 1881085 | QTL | systematic lupus erythematosus susceptibility 1a | ||
Sluc5 | 1 | 159 | QTL | susceptibility to lung cancer 5 | ||
D1Mit15 | 1 | 159 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 15 | ||
Nktcn1 | 1 | 3446015 | QTL | natural killer T cell numbers 1 | ||
Tssr14866 | 1 | 5 | - | TSS region | transcription start site region 14866 | |
Tssr14867 | 1 | 4 | - | TSS region | transcription start site region 14867 | |
Tssr14868 | 1 | 3 | - | TSS region | transcription start site region 14868 | |
4833414E09Rik | 1 | 1189 | unclassified non-coding RNA gene | RIKEN cDNA 4833414E09 gene | ||
Tssr9912 | 1 | 13 | + | TSS region | transcription start site region 9912 | |
Tssr14869 | 1 | 2 | - | TSS region | transcription start site region 14869 | |
Tssr14870 | 1 | 11 | - | TSS region | transcription start site region 14870 | |
Tssr14871 | 1 | 11 | - | TSS region | transcription start site region 14871 | |
Tssr14872 | 1 | 27 | - | TSS region | transcription start site region 14872 | |
Tssr14873 | 1 | 39 | - | TSS region | transcription start site region 14873 | |
Tssr14874 | 1 | 20 | - | TSS region | transcription start site region 14874 | |
Tssr14875 | 1 | 18 | - | TSS region | transcription start site region 14875 | |
Tssr14876 | 1 | 24 | - | TSS region | transcription start site region 14876 | |
Tssr14877 | 1 | 9 | - | TSS region | transcription start site region 14877 | |
Tssr14878 | 1 | 73 | - | TSS region | transcription start site region 14878 | |
Tssr14879 | 1 | 14 | - | TSS region | transcription start site region 14879 | |
Tssr14880 | 1 | 44 | - | TSS region | transcription start site region 14880 | |
Tssr14881 | 1 | 11 | - | TSS region | transcription start site region 14881 | |
Tssr14882 | 1 | 21 | - | TSS region | transcription start site region 14882 | |
Tssr14883 | 1 | 41 | - | TSS region | transcription start site region 14883 | |
Cpgi988 | 1 | 217 | CpG island | CpG island 988 | ||
Tssr274 | 1 | 5 | + | TSS region | transcription start site region 274 | |
Gm39696 | 1 | 20279 | - | lncRNA gene | predicted gene, 39696 | |
Mir6348 | 1 | 119 | + | miRNA gene | microRNA 6348 | |
Tssr9913 | 1 | 9 | + | TSS region | transcription start site region 9913 | |
Tssr275 | 1 | 22 | - | TSS region | transcription start site region 275 | |
Gm34320 | 1 | 70051 | - | lncRNA gene | predicted gene, 34320 | |
1700063I16Rik | 1 | 610 | - | unclassified gene | RIKEN cDNA 1700063I16 gene | |
Tssr14884 | 1 | 10 | - | TSS region | transcription start site region 14884 | |
Tssr14885 | 1 | 12 | - | TSS region | transcription start site region 14885 | |
Tssr14886 | 1 | 13 | - | TSS region | transcription start site region 14886 | |
D1Mit540.1 | 1 | 145 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 540.1 | ||
D1Mit540 | 1 | 124 | DNA segment | DNA Segment, Chr 1, Massachusetts Institute of Technology 540 |