Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:16655149-16885159

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Eloc 1 16641725 to 16657042 15317 - protein coding gene elongin C
Tssr11049 1 16655489 to 16655528 39 - TSS region transcription start site region 11049
Cpgi57 1 16656447 to 16657229 782 CpG island CpG island 57
Tssr11050 1 16656843 to 16656897 54 - TSS region transcription start site region 11050
Tssr11051 1 16656908 to 16656922 14 - TSS region transcription start site region 11051
Tssr6002 1 16656979 to 16656984 5 + TSS region transcription start site region 6002
Tssr11052 1 16657033 to 16657049 16 - TSS region transcription start site region 11052
D030040B21Rik 1 16657552 to 16662278 4726 + lincRNA gene RIKEN cDNA D030040B21 gene
Tssr6003 1 16661532 to 16661545 13 + TSS region transcription start site region 6003
Tssr6004 1 16661568 to 16661574 6 + TSS region transcription start site region 6004
Tssr13 1 16661608 to 16661615 7 + TSS region transcription start site region 13
Gm7654 1 16662980 to 16663662 682 - pseudogene predicted gene 7654
Cpgi58 1 16664996 to 16665690 694 CpG island CpG island 58
Tssr6005 1 16665180 to 16665185 5 + TSS region transcription start site region 6005
Tssr6006 1 16665189 to 16665264 75 + TSS region transcription start site region 6006
Tmem70 1 16665207 to 16678275 13068 + protein coding gene transmembrane protein 70
Tssr14 1 16665274 to 16665279 5 + TSS region transcription start site region 14
Tssr6007 1 16688032 to 16688073 41 + TSS region transcription start site region 6007
Tssr11053 1 16688143 to 16688156 13 - TSS region transcription start site region 11053
Tssr6008 1 16688405 to 16688458 53 + TSS region transcription start site region 6008
Ly96 1 16688456 to 16709605 21149 + protein coding gene lymphocyte antigen 96
Tssr6009 1 16688459 to 16688471 12 + TSS region transcription start site region 6009
Tssr6010 1 16688507 to 16688518 11 + TSS region transcription start site region 6010
Tssr11054 1 16688937 to 16688963 26 - TSS region transcription start site region 11054
Tssr6011 1 16691731 to 16691748 17 + TSS region transcription start site region 6011
Tssr6012 1 16709469 to 16709481 12 + TSS region transcription start site region 6012
D1Mit168 1 16746927 to 16747061 134 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 168
Gm29649 1 16758205 to 16758623 418 - pseudogene predicted gene 29649
Gm5828 1 16768279 to 16770138 1859 - pseudogene predicted gene 5828
Tssr11055 1 16770149 to 16770159 10 - TSS region transcription start site region 11055
Tssr6013 1 16814249 to 16814256 7 + TSS region transcription start site region 6013
Tssr6014 1 16814297 to 16814304 7 + TSS region transcription start site region 6014