Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:166128369-166348975

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr9859 1 166130215 to 166130231 16 + TSS region transcription start site region 9859
Tssr9860 1 166130247 to 166130266 19 + TSS region transcription start site region 9860
Tssr9861 1 166130411 to 166130424 13 + TSS region transcription start site region 9861
Tssr9862 1 166130436 to 166130462 26 + TSS region transcription start site region 9862
Gpa33 1 166130460 to 166166510 36050 + protein coding gene glycoprotein A33 (transmembrane)
Tssr9863 1 166130468 to 166130479 11 + TSS region transcription start site region 9863
Tssr9864 1 166130517 to 166130528 11 + TSS region transcription start site region 9864
Cpgi962 1 166138380 to 166138596 216 CpG island CpG island 962
Tssr9865 1 166155006 to 166155017 11 + TSS region transcription start site region 9865
Cpgi963 1 166160676 to 166160835 159 CpG island CpG island 963
Tssr9866 1 166165416 to 166165428 12 + TSS region transcription start site region 9866
Tssr9867 1 166165834 to 166165843 9 + TSS region transcription start site region 9867
Mael 1 166201385 to 166238744 37359 - protein coding gene maelstrom spermatogenic transposon silencer
D1Mit401 1 166203694 to 166203790 96 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 401
Tssr14814 1 166236907 to 166236925 18 - TSS region transcription start site region 14814
Cpgi964 1 166238369 to 166238975 606 CpG island CpG island 964
Tssr14815 1 166238427 to 166238442 15 - TSS region transcription start site region 14815
Tssr14816 1 166238686 to 166238719 33 - TSS region transcription start site region 14816
Tssr14817 1 166238725 to 166238762 37 - TSS region transcription start site region 14817
Cpgi965 1 166253798 to 166254982 1184 CpG island CpG island 965
Tssr9868 1 166254050 to 166254090 40 + TSS region transcription start site region 9868
Tssr9869 1 166254095 to 166254156 61 + TSS region transcription start site region 9869
Ildr2 1 166254139 to 166316823 62684 + protein coding gene immunoglobulin-like domain containing receptor 2
Tssr9870 1 166254159 to 166254170 11 + TSS region transcription start site region 9870
Tssr9871 1 166254186 to 166254249 63 + TSS region transcription start site region 9871
Tssr9872 1 166256593 to 166256601 8 + TSS region transcription start site region 9872
Cpgi966 1 166282760 to 166282978 218 CpG island CpG island 966
5330438I03Rik 1 166306741 to 166309585 2844 - antisense lncRNA gene RIKEN cDNA 5330438I03 gene
Cpgi967 1 166308559 to 166309688 1129 CpG island CpG island 967
Tssr9873 1 166339420 to 166339427 7 + TSS region transcription start site region 9873