Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:165815150-166052672

41 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cd247	1	165788681 to 165877277	88596	+	protein coding gene	CD247 antigen
D1Mit144	1	165824529 to 165824652	123		DNA segment	DNA segment, Chr 1, Massachusetts Institute of Technology 144
Tssr9849	1	165825760 to 165825777	17	+	TSS region	transcription start site region 9849
Tssr14797	1	165836481 to 165836505	24	-	TSS region	transcription start site region 14797
Tssr9850	1	165838672 to 165838676	4	+	TSS region	transcription start site region 9850
Tssr268	1	165838923 to 165838928	5	+	TSS region	transcription start site region 268
Tssr269	1	165839886 to 165839898	12	-	TSS region	transcription start site region 269
Cpgi956	1	165840879 to 165841197	318		CpG island	CpG island 956
Tssr9851	1	165841056 to 165841067	11	+	TSS region	transcription start site region 9851
Tssr9852	1	165841669 to 165841682	13	+	TSS region	transcription start site region 9852
Gm32999	1	165844047 to 165844608	561	-	lncRNA gene	predicted gene, 32999
Cpgi957	1	165844856 to 165845572	716		CpG island	CpG island 957
Gm37856	1	165845087 to 165846085	998	-	unclassified gene	predicted gene, 37856
Gm37469	1	165848155 to 165849044	889	-	antisense lncRNA gene	predicted gene, 37469
Tssr14798	1	165848955 to 165848987	32	-	TSS region	transcription start site region 14798
Tssr14799	1	165849039 to 165849050	11	-	TSS region	transcription start site region 14799
Tssr14800	1	165849053 to 165849073	20	-	TSS region	transcription start site region 14800
Tssr9853	1	165851588 to 165851591	3	+	TSS region	transcription start site region 9853
Tssr9854	1	165856158 to 165856206	48	+	TSS region	transcription start site region 9854
Tssr9855	1	165864629 to 165864634	5	+	TSS region	transcription start site region 9855
Tssr9856	1	165864642 to 165864660	18	+	TSS region	transcription start site region 9856
Pou2f1	1	165865150 to 166002672	137522	-	protein coding gene	POU domain, class 2, transcription factor 1
A430104F18Rik	1	165872052 to 165875279	3227		unclassified non-coding RNA gene	RIKEN cDNA A430104F18 gene
A830054O07Rik	1	165883440 to 165887183	3743		unclassified gene	RIKEN cDNA A830054O07 gene
Tssr14801	1	165935018 to 165935036	18	-	TSS region	transcription start site region 14801
Gm17976	1	165941617 to 165943505	1888	+	pseudogene	predicted gene, 17976
Tssr14802	1	165948535 to 165948537	2	-	TSS region	transcription start site region 14802
A630006J10Rik	1	165997253 to 166001285	4032		unclassified gene	RIKEN cDNA A630006J10 gene
Cpgi958	1	166001367 to 166003733	2366		CpG island	CpG island 958
Tssr14803	1	166002591 to 166002609	18	-	TSS region	transcription start site region 14803
Tssr14804	1	166002613 to 166002647	34	-	TSS region	transcription start site region 14804
Gm26665	1	166002960 to 166038256	35296	+	lincRNA gene	predicted gene, 26665
Tssr270	1	166003344 to 166003391	47	-	TSS region	transcription start site region 270
Gm7626	1	166043339 to 166043691	352	-	pseudogene	predicted gene 7626
Cpgi959	1	166043421 to 166043731	310		CpG island	CpG island 959
Gm33224	1	166045452 to 166049086	3634	-	lncRNA gene	predicted gene, 33224
Tssr14805	1	166047823 to 166047834	11	-	TSS region	transcription start site region 14805
Tssr14806	1	166047841 to 166047850	9	-	TSS region	transcription start site region 14806
Cpgi960	1	166047863 to 166048295	432		CpG island	CpG island 960
Gm39693	1	166049283 to 166050951	1668	+	lncRNA gene	predicted gene, 39693
Tssr14807	1	166049289 to 166049299	10	-	TSS region	transcription start site region 14807