Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:165670642-165870717

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95 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rcsd1 1 165648945 to 165710063 61118 - protein coding gene RCSD domain containing 1
Tssr14776 1 165678822 to 165678843 21 - TSS region transcription start site region 14776
Tssr14777 1 165678918 to 165678940 22 - TSS region transcription start site region 14777
Tssr14778 1 165685521 to 165685525 4 - TSS region transcription start site region 14778
Tssr9813 1 165689756 to 165689767 11 + TSS region transcription start site region 9813
Gm44458 1 165694765 to 165694907 142 + miRNA gene predicted gene, 44458
Tssr14779 1 165696739 to 165696750 11 - TSS region transcription start site region 14779
Tssr14780 1 165697458 to 165697466 8 - TSS region transcription start site region 14780
Tssr14781 1 165700929 to 165700941 12 - TSS region transcription start site region 14781
Tssr14782 1 165700991 to 165701004 13 - TSS region transcription start site region 14782
Cpgi954 1 165707671 to 165708323 652 CpG island CpG island 954
Tssr14783 1 165707992 to 165708008 16 - TSS region transcription start site region 14783
Tssr14784 1 165708009 to 165708029 20 - TSS region transcription start site region 14784
Tssr14785 1 165708057 to 165708078 21 - TSS region transcription start site region 14785
Tssr14786 1 165708088 to 165708099 11 - TSS region transcription start site region 14786
Tssr9814 1 165708195 to 165708240 45 + TSS region transcription start site region 9814
Tssr14787 1 165709668 to 165709694 26 - TSS region transcription start site region 14787
Tssr14788 1 165709718 to 165709742 24 - TSS region transcription start site region 14788
Tssr14789 1 165709747 to 165709769 22 - TSS region transcription start site region 14789
Tssr14790 1 165709778 to 165709794 16 - TSS region transcription start site region 14790
Gm37073 1 165721556 to 165722777 1221 + lincRNA gene predicted gene, 37073
Tssr14791 1 165722600 to 165722610 10 - TSS region transcription start site region 14791
Tssr9815 1 165722998 to 165723048 50 + TSS region transcription start site region 9815
Tssr9816 1 165723094 to 165723100 6 + TSS region transcription start site region 9816
D1Mit539.1 1 165729139 to 165729267 128 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 539.1
D1Mit539 1 165729238 to 165729358 120 DNA segment DNA Segment, Chr 1, Massachusetts Institute of Technology 539
D1Mit539.2 1 165729335 to 165729466 131 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 539.2
Gm34767 1 165734600 to 165735661 1061 - pseudogene predicted gene, 34767
Gm46168 1 165747450 to 165751792 4342 - lncRNA gene predicted gene, 46168
Cpgi955 1 165763557 to 165764336 779 CpG island CpG island 955
Creg1 1 165763746 to 165775308 11562 + protein coding gene cellular repressor of E1A-stimulated genes 1
Tssr9817 1 165763752 to 165763784 32 + TSS region transcription start site region 9817
Tssr9818 1 165765846 to 165765851 5 + TSS region transcription start site region 9818
Tssr9819 1 165766108 to 165766151 43 + TSS region transcription start site region 9819
Tssr14792 1 165766607 to 165766638 31 - TSS region transcription start site region 14792
Tssr9820 1 165767160 to 165767187 27 + TSS region transcription start site region 9820
Tssr9821 1 165767272 to 165767293 21 + TSS region transcription start site region 9821
Tssr9822 1 165767714 to 165767770 56 + TSS region transcription start site region 9822
Tssr14793 1 165769231 to 165769256 25 - TSS region transcription start site region 14793
Tssr9823 1 165769392 to 165769436 44 + TSS region transcription start site region 9823
Tssr9824 1 165769821 to 165769830 9 + TSS region transcription start site region 9824
Tssr9825 1 165770642 to 165770717 75 + TSS region transcription start site region 9825
Tssr9826 1 165773906 to 165773953 47 + TSS region transcription start site region 9826
Tssr9827 1 165774272 to 165774285 13 + TSS region transcription start site region 9827
Tssr9828 1 165774290 to 165774299 9 + TSS region transcription start site region 9828
Tssr9829 1 165774300 to 165774315 15 + TSS region transcription start site region 9829
Tssr9830 1 165774323 to 165774333 10 + TSS region transcription start site region 9830
Tssr9831 1 165774359 to 165774380 21 + TSS region transcription start site region 9831
Tssr9832 1 165774408 to 165774430 22 + TSS region transcription start site region 9832
Tssr9833 1 165774476 to 165774483 7 + TSS region transcription start site region 9833
Tssr9834 1 165774574 to 165774585 11 + TSS region transcription start site region 9834
Tssr9835 1 165774595 to 165774606 11 + TSS region transcription start site region 9835
Tssr9836 1 165774612 to 165774623 11 + TSS region transcription start site region 9836
Tssr9837 1 165774723 to 165774727 4 + TSS region transcription start site region 9837
Tssr9838 1 165774756 to 165774767 11 + TSS region transcription start site region 9838
Tssr9839 1 165774805 to 165774818 13 + TSS region transcription start site region 9839
Tssr14794 1 165775299 to 165775304 5 - TSS region transcription start site region 14794
Gm36972 1 165775868 to 165777155 1287 - lincRNA gene predicted gene, 36972
Tssr9840 1 165780724 to 165780754 30 + TSS region transcription start site region 9840
Tssr9841 1 165780755 to 165780771 16 + TSS region transcription start site region 9841
Gm16565 1 165781075 to 165789367 8292 + unclassified non-coding RNA gene predicted gene 16565
Gm24808 1 165785834 to 165785951 117 - rRNA gene predicted gene, 24808
Tssr9842 1 165788659 to 165788662 3 + TSS region transcription start site region 9842
Cd247 1 165788681 to 165877277 88596 + protein coding gene CD247 antigen
Tssr9843 1 165788684 to 165788728 44 + TSS region transcription start site region 9843
Tssr9844 1 165788746 to 165788769 23 + TSS region transcription start site region 9844
Tssr14795 1 165789997 to 165790006 9 - TSS region transcription start site region 14795
Tssr14796 1 165790063 to 165790081 18 - TSS region transcription start site region 14796
Tssr9845 1 165790183 to 165790186 3 + TSS region transcription start site region 9845
Tssr9846 1 165790210 to 165790231 21 + TSS region transcription start site region 9846
A130040G06Rik 1 165797392 to 165800927 3535 unclassified non-coding RNA gene RIKEN cDNA A130040G06 gene
Tssr9847 1 165809441 to 165809455 14 + TSS region transcription start site region 9847
Gm23402 1 165809636 to 165809742 106 - snRNA gene predicted gene, 23402
Tssr9848 1 165809730 to 165809734 4 + TSS region transcription start site region 9848
D1Mit144 1 165824529 to 165824652 123 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 144
Tssr9849 1 165825760 to 165825777 17 + TSS region transcription start site region 9849
Tssr14797 1 165836481 to 165836505 24 - TSS region transcription start site region 14797
Tssr9850 1 165838672 to 165838676 4 + TSS region transcription start site region 9850
Tssr268 1 165838923 to 165838928 5 + TSS region transcription start site region 268
Tssr269 1 165839886 to 165839898 12 - TSS region transcription start site region 269
Cpgi956 1 165840879 to 165841197 318 CpG island CpG island 956
Tssr9851 1 165841056 to 165841067 11 + TSS region transcription start site region 9851
Tssr9852 1 165841669 to 165841682 13 + TSS region transcription start site region 9852
Gm32999 1 165844047 to 165844608 561 - lncRNA gene predicted gene, 32999
Cpgi957 1 165844856 to 165845572 716 CpG island CpG island 957
Gm37856 1 165845087 to 165846085 998 - unclassified gene predicted gene, 37856
Gm37469 1 165848155 to 165849044 889 - antisense lncRNA gene predicted gene, 37469
Tssr14798 1 165848955 to 165848987 32 - TSS region transcription start site region 14798
Tssr14799 1 165849039 to 165849050 11 - TSS region transcription start site region 14799
Tssr14800 1 165849053 to 165849073 20 - TSS region transcription start site region 14800
Tssr9853 1 165851588 to 165851591 3 + TSS region transcription start site region 9853
Tssr9854 1 165856158 to 165856206 48 + TSS region transcription start site region 9854
Tssr9855 1 165864629 to 165864634 5 + TSS region transcription start site region 9855
Tssr9856 1 165864642 to 165864660 18 + TSS region transcription start site region 9856
Pou2f1 1 165865150 to 166002672 137522 - protein coding gene POU domain, class 2, transcription factor 1