Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Lrnx12 | 1 | 56277741 | QTL | learning-contextual 12 | ||
Ap1q | 1 | 20726192 | QTL | alcohol preference 1 QTL | ||
Leusq1 | 1 | 11584366 | QTL | leucocytosis susceptibility QTL 1 | ||
Hcs7 | 1 | 11584366 | QTL | hepatocarcinogenesis susceptibility 7 | ||
Dcaf6 | 1 | 131053 | - | protein coding gene | DDB1 and CUL4 associated factor 6 | |
Cpgi951 | 1 | 2214 | CpG island | CpG island 951 | ||
Tssr14769 | 1 | 57 | - | TSS region | transcription start site region 14769 | |
Tssr14770 | 1 | 33 | - | TSS region | transcription start site region 14770 | |
Tssr9805 | 1 | 67 | + | TSS region | transcription start site region 9805 | |
Tssr9806 | 1 | 49 | + | TSS region | transcription start site region 9806 | |
Mpc2 | 1 | 20006 | + | protein coding gene | mitochondrial pyruvate carrier 2 | |
Tssr9807 | 1 | 30 | + | TSS region | transcription start site region 9807 | |
Tssr9808 | 1 | 11 | + | TSS region | transcription start site region 9808 | |
Gm37860 | 1 | 1033 | + | unclassified gene | predicted gene, 37860 | |
Tssr9809 | 1 | 38 | + | TSS region | transcription start site region 9809 | |
Adcy10 | 1 | 91591 | + | protein coding gene | adenylate cyclase 10 | |
Gm6050 | 1 | 388 | + | pseudogene | predicted gene 6050 | |
Gm18186 | 1 | 1579 | + | pseudogene | predicted gene, 18186 | |
Gm38325 | 1 | 1376 | - | antisense lncRNA gene | predicted gene, 38325 | |
Gm23599 | 1 | 250 | - | unclassified non-coding RNA gene | predicted gene, 23599 | |
Gm23208 | 1 | 126 | - | snoRNA gene | predicted gene, 23208 | |
Gm38210 | 1 | 808 | + | unclassified gene | predicted gene, 38210 | |
Mpzl1 | 1 | 42298 | - | protein coding gene | myelin protein zero-like 1 | |
Tssr14771 | 1 | 3 | - | TSS region | transcription start site region 14771 | |
Gm37559 | 1 | 831 | - | pseudogene | predicted gene, 37559 | |
Tssr14772 | 1 | 4 | - | TSS region | transcription start site region 14772 | |
Cpgi952 | 1 | 922 | CpG island | CpG island 952 | ||
Tssr14773 | 1 | 125 | - | TSS region | transcription start site region 14773 | |
n-TPagg2 | 1 | 71 | + | tRNA gene | nuclear encoded tRNA proline 2 (anticodon AGG) | |
Cpgi953 | 1 | 1168 | CpG island | CpG island 953 | ||
n-TPcgg2 | 1 | 71 | - | tRNA gene | nuclear encoded tRNA proline 2 (anticodon CGG) | |
Gm18407 | 1 | 789 | - | pseudogene | predicted gene, 18407 | |
Rcsd1 | 1 | 61118 | - | protein coding gene | RCSD domain containing 1 | |
Tssr14774 | 1 | 9 | - | TSS region | transcription start site region 14774 | |
Tssr9810 | 1 | 7 | + | TSS region | transcription start site region 9810 | |
Tssr9811 | 1 | 16 | + | TSS region | transcription start site region 9811 | |
Tssr9812 | 1 | 29 | + | TSS region | transcription start site region 9812 | |
Tssr14775 | 1 | 13 | - | TSS region | transcription start site region 14775 | |
Tssr14776 | 1 | 21 | - | TSS region | transcription start site region 14776 | |
Tssr14777 | 1 | 22 | - | TSS region | transcription start site region 14777 | |
Tssr14778 | 1 | 4 | - | TSS region | transcription start site region 14778 | |
Tssr9813 | 1 | 11 | + | TSS region | transcription start site region 9813 | |
Gm44458 | 1 | 142 | + | miRNA gene | predicted gene, 44458 | |
Tssr14779 | 1 | 11 | - | TSS region | transcription start site region 14779 | |
Tssr14780 | 1 | 8 | - | TSS region | transcription start site region 14780 | |
Tssr14781 | 1 | 12 | - | TSS region | transcription start site region 14781 | |
Tssr14782 | 1 | 13 | - | TSS region | transcription start site region 14782 | |
Cpgi954 | 1 | 652 | CpG island | CpG island 954 | ||
Tssr14783 | 1 | 16 | - | TSS region | transcription start site region 14783 | |
Tssr14784 | 1 | 20 | - | TSS region | transcription start site region 14784 | |
Tssr14785 | 1 | 21 | - | TSS region | transcription start site region 14785 | |
Tssr14786 | 1 | 11 | - | TSS region | transcription start site region 14786 | |
Tssr9814 | 1 | 45 | + | TSS region | transcription start site region 9814 | |
Tssr14787 | 1 | 26 | - | TSS region | transcription start site region 14787 | |
Tssr14788 | 1 | 24 | - | TSS region | transcription start site region 14788 | |
Tssr14789 | 1 | 22 | - | TSS region | transcription start site region 14789 | |
Tssr14790 | 1 | 16 | - | TSS region | transcription start site region 14790 | |
Gm37073 | 1 | 1221 | + | lincRNA gene | predicted gene, 37073 | |
Tssr14791 | 1 | 10 | - | TSS region | transcription start site region 14791 | |
Tssr9815 | 1 | 50 | + | TSS region | transcription start site region 9815 | |
Tssr9816 | 1 | 6 | + | TSS region | transcription start site region 9816 | |
D1Mit539.1 | 1 | 128 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 539.1 | ||
D1Mit539 | 1 | 120 | DNA segment | DNA Segment, Chr 1, Massachusetts Institute of Technology 539 | ||
D1Mit539.2 | 1 | 131 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 539.2 | ||
Gm34767 | 1 | 1061 | - | pseudogene | predicted gene, 34767 | |
Gm46168 | 1 | 4342 | - | lncRNA gene | predicted gene, 46168 | |
Cpgi955 | 1 | 779 | CpG island | CpG island 955 | ||
Creg1 | 1 | 11562 | + | protein coding gene | cellular repressor of E1A-stimulated genes 1 | |
Tssr9817 | 1 | 32 | + | TSS region | transcription start site region 9817 | |
Tssr9818 | 1 | 5 | + | TSS region | transcription start site region 9818 | |
Tssr9819 | 1 | 43 | + | TSS region | transcription start site region 9819 | |
Tssr14792 | 1 | 31 | - | TSS region | transcription start site region 14792 | |
Tssr9820 | 1 | 27 | + | TSS region | transcription start site region 9820 | |
Tssr9821 | 1 | 21 | + | TSS region | transcription start site region 9821 | |
Tssr9822 | 1 | 56 | + | TSS region | transcription start site region 9822 | |
Tssr14793 | 1 | 25 | - | TSS region | transcription start site region 14793 | |
Tssr9823 | 1 | 44 | + | TSS region | transcription start site region 9823 | |
Tssr9824 | 1 | 9 | + | TSS region | transcription start site region 9824 | |
Tssr9825 | 1 | 75 | + | TSS region | transcription start site region 9825 | |
Tssr9826 | 1 | 47 | + | TSS region | transcription start site region 9826 | |
Tssr9827 | 1 | 13 | + | TSS region | transcription start site region 9827 | |
Tssr9828 | 1 | 9 | + | TSS region | transcription start site region 9828 | |
Tssr9829 | 1 | 15 | + | TSS region | transcription start site region 9829 | |
Tssr9830 | 1 | 10 | + | TSS region | transcription start site region 9830 | |
Tssr9831 | 1 | 21 | + | TSS region | transcription start site region 9831 | |
Tssr9832 | 1 | 22 | + | TSS region | transcription start site region 9832 | |
Tssr9833 | 1 | 7 | + | TSS region | transcription start site region 9833 | |
Tssr9834 | 1 | 11 | + | TSS region | transcription start site region 9834 | |
Tssr9835 | 1 | 11 | + | TSS region | transcription start site region 9835 | |
Tssr9836 | 1 | 11 | + | TSS region | transcription start site region 9836 | |
Tssr9837 | 1 | 4 | + | TSS region | transcription start site region 9837 | |
Tssr9838 | 1 | 11 | + | TSS region | transcription start site region 9838 | |
Tssr9839 | 1 | 13 | + | TSS region | transcription start site region 9839 | |
Tssr14794 | 1 | 5 | - | TSS region | transcription start site region 14794 | |
Gm36972 | 1 | 1287 | - | lincRNA gene | predicted gene, 36972 | |
Tssr9840 | 1 | 30 | + | TSS region | transcription start site region 9840 | |
Tssr9841 | 1 | 16 | + | TSS region | transcription start site region 9841 | |
Gm16565 | 1 | 8292 | + | unclassified non-coding RNA gene | predicted gene 16565 | |
Gm24808 | 1 | 117 | - | rRNA gene | predicted gene, 24808 | |
Tssr9842 | 1 | 3 | + | TSS region | transcription start site region 9842 | |
Cd247 | 1 | 88596 | + | protein coding gene | CD247 antigen | |
Tssr9843 | 1 | 44 | + | TSS region | transcription start site region 9843 | |
Tssr9844 | 1 | 23 | + | TSS region | transcription start site region 9844 | |
Tssr14795 | 1 | 9 | - | TSS region | transcription start site region 14795 | |
Tssr14796 | 1 | 18 | - | TSS region | transcription start site region 14796 | |
Tssr9845 | 1 | 3 | + | TSS region | transcription start site region 9845 | |
Tssr9846 | 1 | 21 | + | TSS region | transcription start site region 9846 | |
A130040G06Rik | 1 | 3535 | unclassified non-coding RNA gene | RIKEN cDNA A130040G06 gene | ||
Tssr9847 | 1 | 14 | + | TSS region | transcription start site region 9847 | |
Gm23402 | 1 | 106 | - | snRNA gene | predicted gene, 23402 | |
Tssr9848 | 1 | 4 | + | TSS region | transcription start site region 9848 | |
D1Mit144 | 1 | 123 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 144 | ||
Tssr9849 | 1 | 17 | + | TSS region | transcription start site region 9849 | |
Tssr14797 | 1 | 24 | - | TSS region | transcription start site region 14797 | |
Tssr9850 | 1 | 4 | + | TSS region | transcription start site region 9850 | |
Tssr268 | 1 | 5 | + | TSS region | transcription start site region 268 | |
Tssr269 | 1 | 12 | - | TSS region | transcription start site region 269 | |
Cpgi956 | 1 | 318 | CpG island | CpG island 956 | ||
Tssr9851 | 1 | 11 | + | TSS region | transcription start site region 9851 | |
Tssr9852 | 1 | 13 | + | TSS region | transcription start site region 9852 | |
Gm32999 | 1 | 561 | - | lncRNA gene | predicted gene, 32999 | |
Cpgi957 | 1 | 716 | CpG island | CpG island 957 | ||
Gm37856 | 1 | 998 | - | unclassified gene | predicted gene, 37856 | |
Gm37469 | 1 | 889 | - | antisense lncRNA gene | predicted gene, 37469 | |
Tssr14798 | 1 | 32 | - | TSS region | transcription start site region 14798 | |
Tssr14799 | 1 | 11 | - | TSS region | transcription start site region 14799 | |
Tssr14800 | 1 | 20 | - | TSS region | transcription start site region 14800 | |
Tssr9853 | 1 | 3 | + | TSS region | transcription start site region 9853 | |
Tssr9854 | 1 | 48 | + | TSS region | transcription start site region 9854 | |
Tssr9855 | 1 | 5 | + | TSS region | transcription start site region 9855 | |
Tssr9856 | 1 | 18 | + | TSS region | transcription start site region 9856 | |
Pou2f1 | 1 | 137522 | - | protein coding gene | POU domain, class 2, transcription factor 1 | |
A430104F18Rik | 1 | 3227 | unclassified non-coding RNA gene | RIKEN cDNA A430104F18 gene | ||
A830054O07Rik | 1 | 3743 | unclassified gene | RIKEN cDNA A830054O07 gene | ||
Tssr14801 | 1 | 18 | - | TSS region | transcription start site region 14801 | |
Gm17976 | 1 | 1888 | + | pseudogene | predicted gene, 17976 | |
Tssr14802 | 1 | 2 | - | TSS region | transcription start site region 14802 | |
A630006J10Rik | 1 | 4032 | unclassified gene | RIKEN cDNA A630006J10 gene | ||
Cpgi958 | 1 | 2366 | CpG island | CpG island 958 | ||
Tssr14803 | 1 | 18 | - | TSS region | transcription start site region 14803 | |
Tssr14804 | 1 | 34 | - | TSS region | transcription start site region 14804 | |
Gm26665 | 1 | 35296 | + | lincRNA gene | predicted gene, 26665 | |
Tssr270 | 1 | 47 | - | TSS region | transcription start site region 270 | |
Gm7626 | 1 | 352 | - | pseudogene | predicted gene 7626 | |
Cpgi959 | 1 | 310 | CpG island | CpG island 959 | ||
Gm33224 | 1 | 3634 | - | lncRNA gene | predicted gene, 33224 | |
Tssr14805 | 1 | 11 | - | TSS region | transcription start site region 14805 | |
Tssr14806 | 1 | 9 | - | TSS region | transcription start site region 14806 | |
Cpgi960 | 1 | 432 | CpG island | CpG island 960 | ||
Gm39693 | 1 | 1668 | + | lncRNA gene | predicted gene, 39693 | |
Tssr14807 | 1 | 10 | - | TSS region | transcription start site region 14807 | |
Gm37923 | 1 | 160 | + | lincRNA gene | predicted gene, 37923 | |
Dusp27 | 1 | 29750 | - | protein coding gene | dual specificity phosphatase 27 (putative) | |
Cpgi961 | 1 | 289 | CpG island | CpG island 961 | ||
Tssr14808 | 1 | 4 | - | TSS region | transcription start site region 14808 | |
Tssr9857 | 1 | 17 | + | TSS region | transcription start site region 9857 | |
Tssr14809 | 1 | 12 | - | TSS region | transcription start site region 14809 | |
Tssr9858 | 1 | 11 | + | TSS region | transcription start site region 9858 | |
Tssr14810 | 1 | 40 | - | TSS region | transcription start site region 14810 | |
Tssr14811 | 1 | 28 | - | TSS region | transcription start site region 14811 | |
Tssr14812 | 1 | 15 | - | TSS region | transcription start site region 14812 | |
Tssr14813 | 1 | 11 | - | TSS region | transcription start site region 14813 | |
Tssr9859 | 1 | 16 | + | TSS region | transcription start site region 9859 | |
Tssr9860 | 1 | 19 | + | TSS region | transcription start site region 9860 | |
Tssr9861 | 1 | 13 | + | TSS region | transcription start site region 9861 | |
Tssr9862 | 1 | 26 | + | TSS region | transcription start site region 9862 | |
Gpa33 | 1 | 36050 | + | protein coding gene | glycoprotein A33 (transmembrane) | |
Tssr9863 | 1 | 11 | + | TSS region | transcription start site region 9863 | |
Tssr9864 | 1 | 11 | + | TSS region | transcription start site region 9864 | |
Cpgi962 | 1 | 216 | CpG island | CpG island 962 | ||
Tssr9865 | 1 | 11 | + | TSS region | transcription start site region 9865 | |
Cpgi963 | 1 | 159 | CpG island | CpG island 963 | ||
Tssr9866 | 1 | 12 | + | TSS region | transcription start site region 9866 | |
Tssr9867 | 1 | 9 | + | TSS region | transcription start site region 9867 | |
Mael | 1 | 37359 | - | protein coding gene | maelstrom spermatogenic transposon silencer | |
D1Mit401 | 1 | 96 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 401 | ||
Tssr14814 | 1 | 18 | - | TSS region | transcription start site region 14814 | |
Cpgi964 | 1 | 606 | CpG island | CpG island 964 | ||
Tssr14815 | 1 | 15 | - | TSS region | transcription start site region 14815 | |
Tssr14816 | 1 | 33 | - | TSS region | transcription start site region 14816 | |
Tssr14817 | 1 | 37 | - | TSS region | transcription start site region 14817 | |
Cpgi965 | 1 | 1184 | CpG island | CpG island 965 | ||
Tssr9868 | 1 | 40 | + | TSS region | transcription start site region 9868 | |
Tssr9869 | 1 | 61 | + | TSS region | transcription start site region 9869 | |
Ildr2 | 1 | 62684 | + | protein coding gene | immunoglobulin-like domain containing receptor 2 | |
Tssr9870 | 1 | 11 | + | TSS region | transcription start site region 9870 | |
Tssr9871 | 1 | 63 | + | TSS region | transcription start site region 9871 | |
Tssr9872 | 1 | 8 | + | TSS region | transcription start site region 9872 | |
Cpgi966 | 1 | 218 | CpG island | CpG island 966 | ||
5330438I03Rik | 1 | 2844 | - | antisense lncRNA gene | RIKEN cDNA 5330438I03 gene | |
Cpgi967 | 1 | 1129 | CpG island | CpG island 967 | ||
Tssr9873 | 1 | 7 | + | TSS region | transcription start site region 9873 | |
Gm15853 | 1 | 2615 | - | antisense lncRNA gene | predicted gene 15853 | |
Cpgi968 | 1 | 1528 | CpG island | CpG island 968 | ||
Tada1 | 1 | 14454 | + | protein coding gene | transcriptional adaptor 1 | |
Tssr9874 | 1 | 85 | + | TSS region | transcription start site region 9874 | |
Tssr9875 | 1 | 46 | + | TSS region | transcription start site region 9875 | |
Tssr14818 | 1 | 26 | - | TSS region | transcription start site region 14818 | |
Pogk | 1 | 16240 | - | protein coding gene | pogo transposable element with KRAB domain | |
Cpgi969 | 1 | 1061 | CpG island | CpG island 969 |