Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:165080789-165541745

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48 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ity3 1 131228571 to 165311895 34083324 QTL immunity to S. typhimurium 3
4930568G15Rik 1 165066617 to 165091930 25313 - lincRNA gene RIKEN cDNA 4930568G15 gene
Tssr14755 1 165091898 to 165091930 32 - TSS region transcription start site region 14755
Cpgi947 1 165120492 to 165121131 639 CpG island CpG island 947
Tbx19 1 165137855 to 165160773 22918 - protein coding gene T-box 19
Gm16550 1 165148824 to 165148949 125 - pseudogene predicted gene 16550
Tssr14756 1 165160672 to 165160685 13 - TSS region transcription start site region 14756
Tssr14757 1 165160774 to 165160781 7 - TSS region transcription start site region 14757
Tssr14758 1 165160789 to 165160793 4 - TSS region transcription start site region 14758
Sft2d2 1 165174337 to 165194438 20101 - protein coding gene SFT2 domain containing 2
Tssr14759 1 165184733 to 165184737 4 - TSS region transcription start site region 14759
D1Mit453 1 165189555 to 165189649 94 DNA segment DNA Segment, Chr 1, Massachusetts Institute of Technology 453
Cpgi948 1 165193833 to 165194669 836 CpG island CpG island 948
Tssr14760 1 165194289 to 165194304 15 - TSS region transcription start site region 14760
Tssr14761 1 165194310 to 165194366 56 - TSS region transcription start site region 14761
Tiprl 1 165212286 to 165236996 24710 - protein coding gene TIP41, TOR signalling pathway regulator-like (S. cerevisiae)
Tssr14762 1 165219094 to 165219105 11 - TSS region transcription start site region 14762
Tssr14763 1 165219118 to 165219126 8 - TSS region transcription start site region 14763
Tssr14764 1 165227588 to 165227597 9 - TSS region transcription start site region 14764
Gm38190 1 165230371 to 165235125 4754 - sense intronic lncRNA gene predicted gene, 38190
Cpgi949 1 165236265 to 165237409 1144 CpG island CpG island 949
Tssr9804 1 165236494 to 165236507 13 + TSS region transcription start site region 9804
Tssr14765 1 165236892 to 165236956 64 - TSS region transcription start site region 14765
Tssr14766 1 165236980 to 165236991 11 - TSS region transcription start site region 14766
Cpgi950 1 165281408 to 165282774 1366 CpG island CpG island 950
Gpr161 1 165295789 to 165326745 30956 + protein coding gene G protein-coupled receptor 161
D1Mit63 1 165311747 to 165311895 148 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 63
Dcaf6 1 165329500 to 165460553 131053 - protein coding gene DDB1 and CUL4 associated factor 6
Tssr14767 1 165329812 to 165329816 4 - TSS region transcription start site region 14767
Tssr14768 1 165377669 to 165377672 3 - TSS region transcription start site region 14768
Gm38368 1 165379519 to 165380853 1334 + unclassified gene predicted gene, 38368
Gm24637 1 165440625 to 165440709 84 + snoRNA gene predicted gene, 24637
Gm37864 1 165451555 to 165454629 3074 - sense intronic lncRNA gene predicted gene, 37864
Cpgi951 1 165459498 to 165461712 2214 CpG island CpG island 951
Tssr14769 1 165460430 to 165460487 57 - TSS region transcription start site region 14769
Tssr14770 1 165460516 to 165460549 33 - TSS region transcription start site region 14770
Tssr9805 1 165460575 to 165460642 67 + TSS region transcription start site region 9805
Tssr9806 1 165461190 to 165461239 49 + TSS region transcription start site region 9806
Mpc2 1 165461208 to 165481214 20006 + protein coding gene mitochondrial pyruvate carrier 2
Tssr9807 1 165461241 to 165461271 30 + TSS region transcription start site region 9807
Tssr9808 1 165461335 to 165461346 11 + TSS region transcription start site region 9808
Gm37860 1 165467500 to 165468533 1033 + unclassified gene predicted gene, 37860
Tssr9809 1 165485168 to 165485206 38 + TSS region transcription start site region 9809
Adcy10 1 165485183 to 165576774 91591 + protein coding gene adenylate cyclase 10
Gm6050 1 165488966 to 165489354 388 + pseudogene predicted gene 6050
Gm18186 1 165493422 to 165495001 1579 + pseudogene predicted gene, 18186
Gm38325 1 165493791 to 165495167 1376 - antisense lncRNA gene predicted gene, 38325
Gm23599 1 165497999 to 165498249 250 - unclassified non-coding RNA gene predicted gene, 23599