Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:164451982-164942771

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47 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Atp1b1 1 164437109 to 164458355 21246 - protein coding gene ATPase, Na+/K+ transporting, beta 1 polypeptide
Tssr9787 1 164453492 to 164453524 32 + TSS region transcription start site region 9787
Tssr14745 1 164453774 to 164453820 46 - TSS region transcription start site region 14745
Cpgi945 1 164457478 to 164459076 1598 CpG island CpG island 945
Tssr14746 1 164457994 to 164458012 18 - TSS region transcription start site region 14746
Tssr14747 1 164458345 to 164458363 18 - TSS region transcription start site region 14747
Tssr9788 1 164458517 to 164458530 13 + TSS region transcription start site region 9788
Tssr9789 1 164458536 to 164458547 11 + TSS region transcription start site region 9789
Tssr14748 1 164458725 to 164458737 12 - TSS region transcription start site region 14748
Gm46167 1 164459962 to 164462819 2857 - lncRNA gene predicted gene, 46167
Tssr14749 1 164460839 to 164460849 10 - TSS region transcription start site region 14749
Tssr14750 1 164460854 to 164460871 17 - TSS region transcription start site region 14750
Gm32391 1 164462442 to 164463989 1547 + lincRNA gene predicted gene, 32391
Gm32459 1 164466054 to 164467951 1897 - lncRNA gene predicted gene, 32459
Gm39691 1 164473207 to 164474120 913 + lncRNA gene predicted gene, 39691
Tssr9790 1 164473504 to 164473535 31 + TSS region transcription start site region 9790
Tssr9791 1 164488955 to 164488957 2 + TSS region transcription start site region 9791
Gm37732 1 164489060 to 164489375 315 + pseudogene predicted gene, 37732
Tssr9792 1 164503306 to 164503330 24 + TSS region transcription start site region 9792
Gm26685 1 164503309 to 164514882 11573 + lincRNA gene predicted gene, 26685
Tssr14751 1 164537560 to 164537569 9 - TSS region transcription start site region 14751
Tssr9793 1 164569738 to 164569765 27 + TSS region transcription start site region 9793
D630023O14Rik 1 164575455 to 164578553 3098 + unclassified gene RIKEN cDNA D630023O14 gene
Tssr9794 1 164631743 to 164631754 11 + TSS region transcription start site region 9794
Gm37754 1 164631757 to 164659238 27481 + lincRNA gene predicted gene, 37754
Gm37853 1 164640953 to 164698233 57280 - lincRNA gene predicted gene, 37853
Gm37184 1 164681982 to 164712771 30789 + lincRNA gene predicted gene, 37184
Gm36945 1 164705419 to 164712541 7122 - lincRNA gene predicted gene, 36945
D1Mit35 1 164730688 to 164730902 214 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 35
D1Mit269 1 164767786 to 164767924 138 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 269
Tssr9795 1 164796617 to 164796628 11 + TSS region transcription start site region 9795
Tssr9796 1 164796631 to 164796649 18 + TSS region transcription start site region 9796
Tssr9797 1 164796696 to 164796721 25 + TSS region transcription start site region 9797
Tssr9798 1 164796723 to 164796734 11 + TSS region transcription start site region 9798
Dpt 1 164796732 to 164824266 27534 + protein coding gene dermatopontin
Tssr9799 1 164796735 to 164796746 11 + TSS region transcription start site region 9799
Tssr9800 1 164796758 to 164796769 11 + TSS region transcription start site region 9800
Gm32569 1 164797009 to 164805050 8041 - antisense lncRNA gene predicted gene, 32569
Tssr9801 1 164823838 to 164823844 6 + TSS region transcription start site region 9801
Gm32652 1 164858686 to 164900207 41521 - lncRNA gene predicted gene, 32652
Gm20743 1 164863121 to 164871438 8317 + lncRNA gene predicted gene, 20743
Gm37403 1 164872833 to 164876353 3520 - unclassified gene predicted gene, 37403
Tssr14752 1 164884980 to 164884990 10 - TSS region transcription start site region 14752
Cpgi946 1 164899113 to 164899384 271 CpG island CpG island 946
Tssr14753 1 164899580 to 164899596 16 - TSS region transcription start site region 14753
Xcl1 1 164931648 to 164935510 3862 - protein coding gene chemokine (C motif) ligand 1
Tssr14754 1 164935522 to 164935527 5 - TSS region transcription start site region 14754