Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Ity3 | 1 | 34083324 | QTL | immunity to S. typhimurium 3 | ||
Blzf1 | 1 | 17684 | - | protein coding gene | basic leucine zipper nuclear factor 1 | |
Cpgi944 | 1 | 972 | CpG island | CpG island 944 | ||
Tssr14727 | 1 | 11 | - | TSS region | transcription start site region 14727 | |
Tssr14728 | 1 | 26 | - | TSS region | transcription start site region 14728 | |
Tssr14729 | 1 | 61 | - | TSS region | transcription start site region 14729 | |
Tssr14730 | 1 | 60 | - | TSS region | transcription start site region 14730 | |
Nme7 | 1 | 129638 | + | protein coding gene | NME/NM23 family member 7 | |
Tssr9780 | 1 | 16 | + | TSS region | transcription start site region 9780 | |
Tssr9781 | 1 | 55 | + | TSS region | transcription start site region 9781 | |
Berr1 | 1 | 26486417 | QTL | berghei resistance locus 1 | ||
D1Mit203 | 1 | 148 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 203 | ||
Tssr9782 | 1 | 9 | + | TSS region | transcription start site region 9782 | |
Tssr9783 | 1 | 15 | + | TSS region | transcription start site region 9783 | |
Pcho7 | 1 | 0 | QTL | plasma cholesterol 7 | ||
Aath6 | 1 | 0 | QTL | aortic arch atherosclerosis 6 | ||
Gm39690 | 1 | 1344 | - | lncRNA gene | predicted gene, 39690 | |
Gm37411 | 1 | 2281 | + | unclassified gene | predicted gene, 37411 | |
Atp1b1 | 1 | 21246 | - | protein coding gene | ATPase, Na+/K+ transporting, beta 1 polypeptide | |
Tssr14731 | 1 | 9 | - | TSS region | transcription start site region 14731 | |
Tssr14732 | 1 | 21 | - | TSS region | transcription start site region 14732 | |
Tssr14733 | 1 | 11 | - | TSS region | transcription start site region 14733 | |
Tssr14734 | 1 | 28 | - | TSS region | transcription start site region 14734 | |
Tssr14735 | 1 | 14 | - | TSS region | transcription start site region 14735 | |
Tssr14736 | 1 | 22 | - | TSS region | transcription start site region 14736 | |
Tssr14737 | 1 | 19 | - | TSS region | transcription start site region 14737 | |
Tssr14738 | 1 | 20 | - | TSS region | transcription start site region 14738 | |
Tssr14739 | 1 | 38 | - | TSS region | transcription start site region 14739 | |
Tssr14740 | 1 | 25 | - | TSS region | transcription start site region 14740 | |
Tssr14741 | 1 | 73 | - | TSS region | transcription start site region 14741 | |
Tssr9784 | 1 | 32 | + | TSS region | transcription start site region 9784 | |
Tssr14742 | 1 | 8 | - | TSS region | transcription start site region 14742 | |
Tssr14743 | 1 | 18 | - | TSS region | transcription start site region 14743 | |
Tssr14744 | 1 | 11 | - | TSS region | transcription start site region 14744 | |
Tssr9785 | 1 | 34 | + | TSS region | transcription start site region 9785 | |
Tssr9786 | 1 | 29 | + | TSS region | transcription start site region 9786 | |
Tssr9787 | 1 | 32 | + | TSS region | transcription start site region 9787 | |
Tssr14745 | 1 | 46 | - | TSS region | transcription start site region 14745 | |
Cpgi945 | 1 | 1598 | CpG island | CpG island 945 | ||
Tssr14746 | 1 | 18 | - | TSS region | transcription start site region 14746 | |
Tssr14747 | 1 | 18 | - | TSS region | transcription start site region 14747 | |
Tssr9788 | 1 | 13 | + | TSS region | transcription start site region 9788 | |
Tssr9789 | 1 | 11 | + | TSS region | transcription start site region 9789 | |
Tssr14748 | 1 | 12 | - | TSS region | transcription start site region 14748 | |
Gm46167 | 1 | 2857 | - | lncRNA gene | predicted gene, 46167 | |
Tssr14749 | 1 | 10 | - | TSS region | transcription start site region 14749 | |
Tssr14750 | 1 | 17 | - | TSS region | transcription start site region 14750 | |
Gm32391 | 1 | 1547 | + | lincRNA gene | predicted gene, 32391 | |
Gm32459 | 1 | 1897 | - | lncRNA gene | predicted gene, 32459 | |
Gm39691 | 1 | 913 | + | lncRNA gene | predicted gene, 39691 | |
Tssr9790 | 1 | 31 | + | TSS region | transcription start site region 9790 | |
Tssr9791 | 1 | 2 | + | TSS region | transcription start site region 9791 | |
Gm37732 | 1 | 315 | + | pseudogene | predicted gene, 37732 | |
Tssr9792 | 1 | 24 | + | TSS region | transcription start site region 9792 | |
Gm26685 | 1 | 11573 | + | lincRNA gene | predicted gene, 26685 | |
Tssr14751 | 1 | 9 | - | TSS region | transcription start site region 14751 | |
Tssr9793 | 1 | 27 | + | TSS region | transcription start site region 9793 | |
D630023O14Rik | 1 | 3098 | + | unclassified gene | RIKEN cDNA D630023O14 gene | |
Tssr9794 | 1 | 11 | + | TSS region | transcription start site region 9794 | |
Gm37754 | 1 | 27481 | + | lincRNA gene | predicted gene, 37754 | |
Gm37853 | 1 | 57280 | - | lincRNA gene | predicted gene, 37853 | |
Gm37184 | 1 | 30789 | + | lincRNA gene | predicted gene, 37184 | |
Gm36945 | 1 | 7122 | - | lincRNA gene | predicted gene, 36945 | |
D1Mit35 | 1 | 214 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 35 | ||
D1Mit269 | 1 | 138 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 269 | ||
Tssr9795 | 1 | 11 | + | TSS region | transcription start site region 9795 | |
Tssr9796 | 1 | 18 | + | TSS region | transcription start site region 9796 | |
Tssr9797 | 1 | 25 | + | TSS region | transcription start site region 9797 | |
Tssr9798 | 1 | 11 | + | TSS region | transcription start site region 9798 | |
Dpt | 1 | 27534 | + | protein coding gene | dermatopontin | |
Tssr9799 | 1 | 11 | + | TSS region | transcription start site region 9799 | |
Tssr9800 | 1 | 11 | + | TSS region | transcription start site region 9800 | |
Gm32569 | 1 | 8041 | - | antisense lncRNA gene | predicted gene, 32569 | |
Tssr9801 | 1 | 6 | + | TSS region | transcription start site region 9801 | |
Gm32652 | 1 | 41521 | - | lncRNA gene | predicted gene, 32652 | |
Gm20743 | 1 | 8317 | + | lncRNA gene | predicted gene, 20743 | |
Gm37403 | 1 | 3520 | - | unclassified gene | predicted gene, 37403 | |
Tssr14752 | 1 | 10 | - | TSS region | transcription start site region 14752 | |
Cpgi946 | 1 | 271 | CpG island | CpG island 946 | ||
Tssr14753 | 1 | 16 | - | TSS region | transcription start site region 14753 | |
Xcl1 | 1 | 3862 | - | protein coding gene | chemokine (C motif) ligand 1 | |
Tssr14754 | 1 | 5 | - | TSS region | transcription start site region 14754 | |
Tssr267 | 1 | 3 | + | TSS region | transcription start site region 267 | |
Gm39692 | 1 | 8886 | - | lncRNA gene | predicted gene, 39692 | |
1700029M03Rik | 1 | 739 | + | lincRNA gene | RIKEN cDNA 1700029M03 gene | |
Tssr9802 | 1 | 16 | + | TSS region | transcription start site region 9802 | |
Tssr9803 | 1 | 19 | + | TSS region | transcription start site region 9803 | |
Gm26042 | 1 | 111 | + | miRNA gene | predicted gene, 26042 | |
Hdlq99 | 1 | 114 | QTL | HDL QTL 99 | ||
D1Mit507 | 1 | 114 | DNA segment | DNA Segment, Chr 1 Massachusetts Institute of Technology 507 | ||
Chol10 | 1 | 114 | QTL | cholesterol 10 | ||
4930568G15Rik | 1 | 25313 | - | lincRNA gene | RIKEN cDNA 4930568G15 gene | |
Tssr14755 | 1 | 32 | - | TSS region | transcription start site region 14755 | |
Cpgi947 | 1 | 639 | CpG island | CpG island 947 | ||
Tbx19 | 1 | 22918 | - | protein coding gene | T-box 19 | |
Gm16550 | 1 | 125 | - | pseudogene | predicted gene 16550 | |
Tssr14756 | 1 | 13 | - | TSS region | transcription start site region 14756 | |
Tssr14757 | 1 | 7 | - | TSS region | transcription start site region 14757 | |
Tssr14758 | 1 | 4 | - | TSS region | transcription start site region 14758 | |
Sft2d2 | 1 | 20101 | - | protein coding gene | SFT2 domain containing 2 | |
Tssr14759 | 1 | 4 | - | TSS region | transcription start site region 14759 | |
D1Mit453 | 1 | 94 | DNA segment | DNA Segment, Chr 1, Massachusetts Institute of Technology 453 | ||
Cpgi948 | 1 | 836 | CpG island | CpG island 948 | ||
Tssr14760 | 1 | 15 | - | TSS region | transcription start site region 14760 | |
Tssr14761 | 1 | 56 | - | TSS region | transcription start site region 14761 | |
Tiprl | 1 | 24710 | - | protein coding gene | TIP41, TOR signalling pathway regulator-like (S. cerevisiae) | |
Tssr14762 | 1 | 11 | - | TSS region | transcription start site region 14762 | |
Tssr14763 | 1 | 8 | - | TSS region | transcription start site region 14763 | |
Tssr14764 | 1 | 9 | - | TSS region | transcription start site region 14764 | |
Gm38190 | 1 | 4754 | - | sense intronic lncRNA gene | predicted gene, 38190 | |
Cpgi949 | 1 | 1144 | CpG island | CpG island 949 | ||
Tssr9804 | 1 | 13 | + | TSS region | transcription start site region 9804 | |
Tssr14765 | 1 | 64 | - | TSS region | transcription start site region 14765 | |
Tssr14766 | 1 | 11 | - | TSS region | transcription start site region 14766 | |
Cpgi950 | 1 | 1366 | CpG island | CpG island 950 | ||
Gpr161 | 1 | 30956 | + | protein coding gene | G protein-coupled receptor 161 | |
D1Mit63 | 1 | 148 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 63 | ||
Dcaf6 | 1 | 131053 | - | protein coding gene | DDB1 and CUL4 associated factor 6 | |
Tssr14767 | 1 | 4 | - | TSS region | transcription start site region 14767 | |
Tssr14768 | 1 | 3 | - | TSS region | transcription start site region 14768 | |
Gm38368 | 1 | 1334 | + | unclassified gene | predicted gene, 38368 | |
Gm24637 | 1 | 84 | + | snoRNA gene | predicted gene, 24637 | |
Gm37864 | 1 | 3074 | - | sense intronic lncRNA gene | predicted gene, 37864 | |
Cpgi951 | 1 | 2214 | CpG island | CpG island 951 | ||
Tssr14769 | 1 | 57 | - | TSS region | transcription start site region 14769 | |
Tssr14770 | 1 | 33 | - | TSS region | transcription start site region 14770 | |
Tssr9805 | 1 | 67 | + | TSS region | transcription start site region 9805 | |
Tssr9806 | 1 | 49 | + | TSS region | transcription start site region 9806 | |
Mpc2 | 1 | 20006 | + | protein coding gene | mitochondrial pyruvate carrier 2 | |
Tssr9807 | 1 | 30 | + | TSS region | transcription start site region 9807 | |
Tssr9808 | 1 | 11 | + | TSS region | transcription start site region 9808 | |
Gm37860 | 1 | 1033 | + | unclassified gene | predicted gene, 37860 | |
Tssr9809 | 1 | 38 | + | TSS region | transcription start site region 9809 | |
Adcy10 | 1 | 91591 | + | protein coding gene | adenylate cyclase 10 | |
Gm6050 | 1 | 388 | + | pseudogene | predicted gene 6050 | |
Gm18186 | 1 | 1579 | + | pseudogene | predicted gene, 18186 | |
Gm38325 | 1 | 1376 | - | antisense lncRNA gene | predicted gene, 38325 | |
Gm23599 | 1 | 250 | - | unclassified non-coding RNA gene | predicted gene, 23599 | |
Gm23208 | 1 | 126 | - | snoRNA gene | predicted gene, 23208 | |
Gm38210 | 1 | 808 | + | unclassified gene | predicted gene, 38210 | |
Mpzl1 | 1 | 42298 | - | protein coding gene | myelin protein zero-like 1 | |
Tssr14771 | 1 | 3 | - | TSS region | transcription start site region 14771 | |
Gm37559 | 1 | 831 | - | pseudogene | predicted gene, 37559 | |
Tssr14772 | 1 | 4 | - | TSS region | transcription start site region 14772 | |
Cpgi952 | 1 | 922 | CpG island | CpG island 952 | ||
Tssr14773 | 1 | 125 | - | TSS region | transcription start site region 14773 | |
n-TPagg2 | 1 | 71 | + | tRNA gene | nuclear encoded tRNA proline 2 (anticodon AGG) | |
Cpgi953 | 1 | 1168 | CpG island | CpG island 953 | ||
n-TPcgg2 | 1 | 71 | - | tRNA gene | nuclear encoded tRNA proline 2 (anticodon CGG) | |
Gm18407 | 1 | 789 | - | pseudogene | predicted gene, 18407 | |
Rcsd1 | 1 | 61118 | - | protein coding gene | RCSD domain containing 1 | |
Tssr14774 | 1 | 9 | - | TSS region | transcription start site region 14774 | |
Tssr9810 | 1 | 7 | + | TSS region | transcription start site region 9810 | |
Tssr9811 | 1 | 16 | + | TSS region | transcription start site region 9811 | |
Tssr9812 | 1 | 29 | + | TSS region | transcription start site region 9812 | |
Tssr14775 | 1 | 13 | - | TSS region | transcription start site region 14775 | |
Tssr14776 | 1 | 21 | - | TSS region | transcription start site region 14776 | |
Tssr14777 | 1 | 22 | - | TSS region | transcription start site region 14777 | |
Tssr14778 | 1 | 4 | - | TSS region | transcription start site region 14778 | |
Tssr9813 | 1 | 11 | + | TSS region | transcription start site region 9813 | |
Gm44458 | 1 | 142 | + | miRNA gene | predicted gene, 44458 | |
Tssr14779 | 1 | 11 | - | TSS region | transcription start site region 14779 | |
Tssr14780 | 1 | 8 | - | TSS region | transcription start site region 14780 | |
Tssr14781 | 1 | 12 | - | TSS region | transcription start site region 14781 | |
Tssr14782 | 1 | 13 | - | TSS region | transcription start site region 14782 | |
Cpgi954 | 1 | 652 | CpG island | CpG island 954 | ||
Tssr14783 | 1 | 16 | - | TSS region | transcription start site region 14783 | |
Tssr14784 | 1 | 20 | - | TSS region | transcription start site region 14784 | |
Tssr14785 | 1 | 21 | - | TSS region | transcription start site region 14785 | |
Tssr14786 | 1 | 11 | - | TSS region | transcription start site region 14786 | |
Tssr9814 | 1 | 45 | + | TSS region | transcription start site region 9814 | |
Tssr14787 | 1 | 26 | - | TSS region | transcription start site region 14787 | |
Tssr14788 | 1 | 24 | - | TSS region | transcription start site region 14788 | |
Tssr14789 | 1 | 22 | - | TSS region | transcription start site region 14789 | |
Tssr14790 | 1 | 16 | - | TSS region | transcription start site region 14790 | |
Gm37073 | 1 | 1221 | + | lincRNA gene | predicted gene, 37073 | |
Tssr14791 | 1 | 10 | - | TSS region | transcription start site region 14791 | |
Tssr9815 | 1 | 50 | + | TSS region | transcription start site region 9815 | |
Tssr9816 | 1 | 6 | + | TSS region | transcription start site region 9816 | |
D1Mit539.1 | 1 | 128 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 539.1 | ||
D1Mit539 | 1 | 120 | DNA segment | DNA Segment, Chr 1, Massachusetts Institute of Technology 539 | ||
D1Mit539.2 | 1 | 131 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 539.2 | ||
Gm34767 | 1 | 1061 | - | pseudogene | predicted gene, 34767 | |
Gm46168 | 1 | 4342 | - | lncRNA gene | predicted gene, 46168 | |
Cpgi955 | 1 | 779 | CpG island | CpG island 955 | ||
Creg1 | 1 | 11562 | + | protein coding gene | cellular repressor of E1A-stimulated genes 1 | |
Tssr9817 | 1 | 32 | + | TSS region | transcription start site region 9817 | |
Tssr9818 | 1 | 5 | + | TSS region | transcription start site region 9818 | |
Tssr9819 | 1 | 43 | + | TSS region | transcription start site region 9819 | |
Tssr14792 | 1 | 31 | - | TSS region | transcription start site region 14792 | |
Tssr9820 | 1 | 27 | + | TSS region | transcription start site region 9820 | |
Tssr9821 | 1 | 21 | + | TSS region | transcription start site region 9821 | |
Tssr9822 | 1 | 56 | + | TSS region | transcription start site region 9822 | |
Tssr14793 | 1 | 25 | - | TSS region | transcription start site region 14793 | |
Tssr9823 | 1 | 44 | + | TSS region | transcription start site region 9823 | |
Tssr9824 | 1 | 9 | + | TSS region | transcription start site region 9824 | |
Tssr9825 | 1 | 75 | + | TSS region | transcription start site region 9825 | |
Tssr9826 | 1 | 47 | + | TSS region | transcription start site region 9826 | |
Tssr9827 | 1 | 13 | + | TSS region | transcription start site region 9827 | |
Tssr9828 | 1 | 9 | + | TSS region | transcription start site region 9828 |