Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:162574789-162874813

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69 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Vamp4 1 162570515 to 162599084 28569 + protein coding gene vesicle-associated membrane protein 4
Tssr9719 1 162581807 to 162581839 32 + TSS region transcription start site region 9719
Tssr9720 1 162588206 to 162588217 11 + TSS region transcription start site region 9720
D1Mit399 1 162614243 to 162614380 137 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 399
Gm5705 1 162628357 to 162629067 710 - pseudogene predicted gene 5705
Tssr9721 1 162639148 to 162639158 10 + TSS region transcription start site region 9721
Myoc 1 162639155 to 162649693 10538 + protein coding gene myocilin
Myocos 1 162647193 to 162658219 11026 - protein coding gene myocilin opposite strand
Cpgi933 1 162648777 to 162649055 278 CpG island CpG island 933
Prrc2c 1 162671785 to 162740570 68785 - protein coding gene proline-rich coiled-coil 2C
Tssr14630 1 162672149 to 162672152 3 - TSS region transcription start site region 14630
Gm27616 1 162674158 to 162674220 62 - miRNA gene predicted gene, 27616
Tssr14631 1 162675209 to 162675213 4 - TSS region transcription start site region 14631
Tssr14632 1 162675487 to 162675542 55 - TSS region transcription start site region 14632
Tssr14633 1 162675877 to 162675881 4 - TSS region transcription start site region 14633
Tssr14634 1 162688172 to 162688187 15 - TSS region transcription start site region 14634
Tssr14635 1 162692404 to 162692437 33 - TSS region transcription start site region 14635
Tssr14636 1 162692825 to 162692838 13 - TSS region transcription start site region 14636
Tssr14637 1 162702208 to 162702231 23 - TSS region transcription start site region 14637
Tssr14638 1 162702235 to 162702246 11 - TSS region transcription start site region 14638
Tssr14639 1 162702252 to 162702266 14 - TSS region transcription start site region 14639
Tssr14640 1 162705544 to 162705564 20 - TSS region transcription start site region 14640
Tssr14641 1 162706130 to 162706145 15 - TSS region transcription start site region 14641
Tssr14642 1 162706177 to 162706191 14 - TSS region transcription start site region 14642
Tssr14643 1 162707828 to 162707843 15 - TSS region transcription start site region 14643
Tssr14644 1 162709588 to 162709604 16 - TSS region transcription start site region 14644
Tssr9722 1 162710345 to 162710505 160 + TSS region transcription start site region 9722
Tssr14645 1 162710416 to 162710428 12 - TSS region transcription start site region 14645
Tssr14646 1 162710458 to 162710482 24 - TSS region transcription start site region 14646
Tssr14647 1 162710502 to 162710515 13 - TSS region transcription start site region 14647
Tssr14648 1 162710751 to 162710801 50 - TSS region transcription start site region 14648
Tssr14649 1 162713341 to 162713360 19 - TSS region transcription start site region 14649
Tssr14650 1 162714376 to 162714384 8 - TSS region transcription start site region 14650
Tssr14651 1 162715456 to 162715484 28 - TSS region transcription start site region 14651
Tssr14652 1 162715694 to 162715712 18 - TSS region transcription start site region 14652
Tssr14653 1 162724764 to 162724780 16 - TSS region transcription start site region 14653
Tssr14654 1 162724789 to 162724813 24 - TSS region transcription start site region 14654
Tssr14655 1 162724824 to 162724857 33 - TSS region transcription start site region 14655
D1Ertd646e 1 162726290 to 162726489 199 DNA segment DNA segment, Chr 1, ERATO Doi 646, expressed
Cpgi934 1 162739784 to 162740806 1022 CpG island CpG island 934
Tssr14656 1 162740491 to 162740533 42 - TSS region transcription start site region 14656
Tssr14657 1 162740540 to 162740551 11 - TSS region transcription start site region 14657
Fmo4 1 162793188 to 162813972 20784 - protein coding gene flavin containing monooxygenase 4
D1Ertd532e 1 162812817 to 162813066 249 DNA segment DNA segment, Chr 1, ERATO Doi 532, expressed
Tssr14658 1 162813243 to 162813291 48 - TSS region transcription start site region 14658
Tssr14659 1 162813873 to 162813883 10 - TSS region transcription start site region 14659
Tssr14660 1 162813942 to 162813953 11 - TSS region transcription start site region 14660
Fmo1 1 162829561 to 162866548 36987 - protein coding gene flavin containing monooxygenase 1
Tssr14661 1 162834303 to 162834307 4 - TSS region transcription start site region 14661
Tssr9723 1 162857242 to 162857248 6 + TSS region transcription start site region 9723
Tssr14662 1 162859556 to 162859572 16 - TSS region transcription start site region 14662
Tssr14663 1 162859684 to 162859735 51 - TSS region transcription start site region 14663
Tssr14664 1 162859811 to 162859825 14 - TSS region transcription start site region 14664
Tssr14665 1 162859831 to 162859842 11 - TSS region transcription start site region 14665
Tssr14666 1 162859872 to 162859883 11 - TSS region transcription start site region 14666
Tssr14667 1 162859919 to 162859973 54 - TSS region transcription start site region 14667
Tssr14668 1 162859984 to 162859994 10 - TSS region transcription start site region 14668
Tssr14669 1 162860060 to 162860077 17 - TSS region transcription start site region 14669
Tssr14670 1 162860079 to 162860094 15 - TSS region transcription start site region 14670
Tssr14671 1 162860097 to 162860108 11 - TSS region transcription start site region 14671
Tssr14672 1 162860114 to 162860126 12 - TSS region transcription start site region 14672
Tssr14673 1 162866359 to 162866402 43 - TSS region transcription start site region 14673
Tssr14674 1 162866425 to 162866432 7 - TSS region transcription start site region 14674
Tssr14675 1 162866440 to 162866451 11 - TSS region transcription start site region 14675
Tssr14676 1 162866463 to 162866468 5 - TSS region transcription start site region 14676
Tssr14677 1 162866483 to 162866501 18 - TSS region transcription start site region 14677
Tssr14678 1 162866502 to 162866616 114 - TSS region transcription start site region 14678
Gm32197 1 162872700 to 162873622 922 + lncRNA gene predicted gene, 32197
Fmo2 1 162874321 to 162898712 24391 - protein coding gene flavin containing monooxygenase 2