Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:161932453-162528034

53 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Bmd1a	1	155962068 to 162317756	6355688		QTL	bone mineral density 1a
Actre11	1	160457095 to 162012496	1555401		QTL	activity response to ethanol 11
4930558K02Rik	1	161942086 to 161979636	37550	-	protein coding gene	RIKEN cDNA 4930558K02 gene
Tssr9705	1	161968953 to 161968971	18	+	TSS region	transcription start site region 9705
Cpgi929	1	161968983 to 161969552	569		CpG island	CpG island 929
Tssr14607	1	161969159 to 161969190	31	-	TSS region	transcription start site region 14607
Tssr9706	1	161969179 to 161969259	80	+	TSS region	transcription start site region 9706
Pigc	1	161969186 to 161973435	4249	+	protein coding gene	phosphatidylinositol glycan anchor biosynthesis, class C
Gm38304	1	161969200 to 162027106	57906	+	antisense lncRNA gene	predicted gene, 38304
Tssr9707	1	161969284 to 161969313	29	+	TSS region	transcription start site region 9707
Tssr14608	1	161979656 to 161979681	25	-	TSS region	transcription start site region 14608
Tssr14609	1	161979684 to 161979687	3	-	TSS region	transcription start site region 14609
Tssr14610	1	161979700 to 161979705	5	-	TSS region	transcription start site region 14610
D1Pgn2	1	161981984 to 161982159	175		DNA segment	DNA segment, Chr 1, Paigen 2
Dnm3	1	161982453 to 162478034	495581	-	protein coding gene	dynamin 3
Tssr14611	1	161985701 to 161985704	3	-	TSS region	transcription start site region 14611
2810442N19Rik	1	162004969 to 162016485	11516	+	antisense lncRNA gene	RIKEN cDNA 2810442N19 gene
D1Mit504	1	162012348 to 162012496	148		DNA segment	DNA Segment, Chr 1 Massachusetts Institute of Technology 504
Tssr14612	1	162028710 to 162028714	4	-	TSS region	transcription start site region 14612
D1Pgn5	1	162035011 to 162035207	196		DNA segment	DNA segment, Chr 1, Paigen 5
D1Mit398	1	162036074 to 162036174	100		DNA segment	DNA segment, Chr 1, Massachusetts Institute of Technology 398
Gm37767	1	162086635 to 162088468	1833	-	unclassified gene	predicted gene, 37767
Tssr14613	1	162134704 to 162134733	29	-	TSS region	transcription start site region 14613
Tssr14614	1	162188851 to 162188859	8	-	TSS region	transcription start site region 14614
D1Mit505	1	162210337 to 162210475	138		DNA segment	DNA Segment, Chr 1 Massachusetts Institute of Technology 505
Tssr9708	1	162217487 to 162217508	21	+	TSS region	transcription start site region 9708
Dnm3os	1	162217623 to 162225550	7927	+	antisense lncRNA gene	dynamin 3, opposite strand
Tssr9709	1	162217657 to 162217671	14	+	TSS region	transcription start site region 9709
Tssr9710	1	162217688 to 162217717	29	+	TSS region	transcription start site region 9710
Mir199a-2	1	162217814 to 162217923	109	+	miRNA gene	microRNA 199a-2
Tssr9711	1	162217903 to 162217906	3	+	TSS region	transcription start site region 9711
Tssr9712	1	162218852 to 162218856	4	+	TSS region	transcription start site region 9712
Tssr9713	1	162221295 to 162221299	4	+	TSS region	transcription start site region 9713
Mir214	1	162223368 to 162223477	109	+	miRNA gene	microRNA 214
Tssr9714	1	162223459 to 162223461	2	+	TSS region	transcription start site region 9714
Tssr14615	1	162246773 to 162246775	2	-	TSS region	transcription start site region 14615
Aath2	1	162250061 to 162250061	0		QTL	aortic arch atherosclerosis 2
Tssr14616	1	162274621 to 162274626	5	-	TSS region	transcription start site region 14616
Gm16101	1	162316092 to 162316521	429	+	pseudogene	predicted gene 16101
Elnt	1	162317638 to 194429220	32111582		QTL	escape latencies during navigation task
Cfbw1	1	162317638 to 162317756	118		QTL	cystic fibrosis body weight 1
D1Mit106	1	162317638 to 162317756	118		DNA segment	DNA segment, Chr 1, Massachusetts Institute of Technology 106
D1Mit107	1	162365239 to 162365340	101		DNA segment	DNA segment, Chr 1, Massachusetts Institute of Technology 107
Gm39688	1	162379896 to 162386091	6195	+	lncRNA gene	predicted gene, 39688
Tssr14617	1	162387215 to 162387216	1	-	TSS region	transcription start site region 14617
Mdq20	1	162458462 to 162458462	0		QTL	mammary ductal QTL 20
Tssr14618	1	162460222 to 162460227	5	-	TSS region	transcription start site region 14618
Gm31985	1	162471426 to 162481653	10227	+	lncRNA gene	predicted gene, 31985
Cpgi930	1	162477233 to 162478277	1044		CpG island	CpG island 930
Gm10176	1	162477680 to 162479943	2263	+	protein coding gene	predicted gene 10176
Tssr14619	1	162477946 to 162478001	55	-	TSS region	transcription start site region 14619
Tssr14620	1	162478004 to 162478022	18	-	TSS region	transcription start site region 14620
Gm46247	1	162500716 to 162500955	239	-	pseudogene	predicted gene, 46247