Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:161869186-162073435

37 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Actre11	1	160457095 to 162012496	1555401		QTL	activity response to ethanol 11
Suco	1	161816114 to 161876682	60568	-	protein coding gene	SUN domain containing ossification factor
Tssr9699	1	161876011 to 161876041	30	+	TSS region	transcription start site region 9699
Cpgi928	1	161876159 to 161877141	982		CpG island	CpG island 928
Tssr14599	1	161876588 to 161876607	19	-	TSS region	transcription start site region 14599
Tssr14600	1	161876610 to 161876647	37	-	TSS region	transcription start site region 14600
Tssr14601	1	161876656 to 161876682	26	-	TSS region	transcription start site region 14601
Tssr14602	1	161876747 to 161876759	12	-	TSS region	transcription start site region 14602
Tssr14603	1	161876780 to 161876821	41	-	TSS region	transcription start site region 14603
Tssr14604	1	161876834 to 161876854	20	-	TSS region	transcription start site region 14604
Tssr9700	1	161877853 to 161877865	12	+	TSS region	transcription start site region 9700
Gm31925	1	161890458 to 161903173	12715	+	lincRNA gene	predicted gene, 31925
Tssr14605	1	161896170 to 161896174	4	-	TSS region	transcription start site region 14605
Tssr9701	1	161896346 to 161896358	12	+	TSS region	transcription start site region 9701
Tssr9702	1	161896368 to 161896381	13	+	TSS region	transcription start site region 9702
Tssr9703	1	161896382 to 161896385	3	+	TSS region	transcription start site region 9703
Tssr9704	1	161896392 to 161896397	5	+	TSS region	transcription start site region 9704
Tssr14606	1	161897331 to 161897341	10	-	TSS region	transcription start site region 14606
4930558K02Rik	1	161942086 to 161979636	37550	-	protein coding gene	RIKEN cDNA 4930558K02 gene
Tssr9705	1	161968953 to 161968971	18	+	TSS region	transcription start site region 9705
Cpgi929	1	161968983 to 161969552	569		CpG island	CpG island 929
Tssr14607	1	161969159 to 161969190	31	-	TSS region	transcription start site region 14607
Tssr9706	1	161969179 to 161969259	80	+	TSS region	transcription start site region 9706
Pigc	1	161969186 to 161973435	4249	+	protein coding gene	phosphatidylinositol glycan anchor biosynthesis, class C
Gm38304	1	161969200 to 162027106	57906	+	antisense lncRNA gene	predicted gene, 38304
Tssr9707	1	161969284 to 161969313	29	+	TSS region	transcription start site region 9707
Tssr14608	1	161979656 to 161979681	25	-	TSS region	transcription start site region 14608
Tssr14609	1	161979684 to 161979687	3	-	TSS region	transcription start site region 14609
Tssr14610	1	161979700 to 161979705	5	-	TSS region	transcription start site region 14610
D1Pgn2	1	161981984 to 161982159	175		DNA segment	DNA segment, Chr 1, Paigen 2
Dnm3	1	161982453 to 162478034	495581	-	protein coding gene	dynamin 3
Tssr14611	1	161985701 to 161985704	3	-	TSS region	transcription start site region 14611
2810442N19Rik	1	162004969 to 162016485	11516	+	antisense lncRNA gene	RIKEN cDNA 2810442N19 gene
D1Mit504	1	162012348 to 162012496	148		DNA segment	DNA Segment, Chr 1 Massachusetts Institute of Technology 504
Tssr14612	1	162028710 to 162028714	4	-	TSS region	transcription start site region 14612
D1Pgn5	1	162035011 to 162035207	196		DNA segment	DNA segment, Chr 1, Paigen 5
D1Mit398	1	162036074 to 162036174	100		DNA segment	DNA segment, Chr 1, Massachusetts Institute of Technology 398