Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:161446573-161796573

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr9690 1 161494649 to 161494656 7 + TSS region transcription start site region 9690
Tnfsf18 1 161494657 to 161505290 10633 + protein coding gene tumor necrosis factor (ligand) superfamily, member 18
Gm31815 1 161517219 to 161591458 74239 - lncRNA gene predicted gene, 31815
Gm25488 1 161552549 to 161552666 117 - rRNA gene predicted gene, 25488
Gm5704 1 161597102 to 161598488 1386 + pseudogene predicted gene 5704
Cnes4 1 161621573 to 161621573 0 QTL C. neoformans susceptibility locus 4
Tssr14582 1 161647124 to 161647135 11 - TSS region transcription start site region 14582
Tssr9691 1 161701371 to 161701383 12 + TSS region transcription start site region 9691
D1Mit266.1 1 161703636 to 161703749 113 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 266.1
Opfa 1 161703778 to 161704023 245 QTL open field activity
D1Mit266 1 161703778 to 161704023 245 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 266
Tssr14583 1 161704659 to 161704679 20 - TSS region transcription start site region 14583
Tssr9692 1 161704823 to 161704834 11 + TSS region transcription start site region 9692
Tssr9693 1 161704865 to 161704871 6 + TSS region transcription start site region 9693
Tssr9694 1 161705497 to 161705516 19 + TSS region transcription start site region 9694
Tssr9695 1 161706069 to 161706073 4 + TSS region transcription start site region 9695
Cpgi927 1 161712996 to 161713168 172 CpG island CpG island 927
Gm37638 1 161713705 to 161714827 1122 + unclassified gene predicted gene, 37638
Gm15429 1 161726242 to 161727489 1247 - pseudogene predicted pseudogene 15429
Gm5049 1 161746185 to 161747645 1460 + pseudogene predicted gene 5049
Tssr9696 1 161747540 to 161747551 11 + TSS region transcription start site region 9696
Gm31869 1 161762401 to 161767502 5101 - lncRNA gene predicted gene, 31869
Tssr9697 1 161766041 to 161766069 28 + TSS region transcription start site region 9697
Tssr14584 1 161766723 to 161766733 10 - TSS region transcription start site region 14584
Tssr14585 1 161775189 to 161775206 17 - TSS region transcription start site region 14585
D1Ins1 1 161779041 to 161779155 114 DNA segment DNA segment, INSERM 1
Fasl 1 161780691 to 161788495 7804 - protein coding gene Fas ligand (TNF superfamily, member 6)
Tssr14586 1 161788359 to 161788375 16 - TSS region transcription start site region 14586
Tssr14587 1 161788449 to 161788456 7 - TSS region transcription start site region 14587
Tssr14588 1 161788464 to 161788471 7 - TSS region transcription start site region 14588
Tssr14589 1 161788472 to 161788483 11 - TSS region transcription start site region 14589
Tssr14590 1 161788489 to 161788496 7 - TSS region transcription start site region 14590
Tssr14591 1 161788500 to 161788506 6 - TSS region transcription start site region 14591
Tssr14592 1 161793248 to 161793252 4 - TSS region transcription start site region 14592
Tssr14593 1 161794564 to 161794600 36 - TSS region transcription start site region 14593