Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:16135473-16555487

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16 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D1Mit119 1 16176457 to 16176602 145 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 119
Gm38249 1 16208197 to 16210517 2320 - unclassified gene predicted gene, 38249
Gm28095 1 16228506 to 16244062 15556 + antisense lncRNA gene predicted gene 28095
Stau2 1 16228803 to 16520182 291379 - protein coding gene staufen double-stranded RNA binding protein 2
Tssr5999 1 16253582 to 16253597 15 + TSS region transcription start site region 5999
Gm7568 1 16253587 to 16263525 9938 + antisense lncRNA gene predicted gene 7568
Tssr11036 1 16294892 to 16294897 5 - TSS region transcription start site region 11036
C130013N14Rik 1 16309437 to 16311722 2285 unclassified gene RIKEN cDNA C130013N14 gene
Tssr11037 1 16345473 to 16345487 14 - TSS region transcription start site region 11037
Cpgi55 1 16518533 to 16520192 1659 CpG island CpG island 55
Tssr11038 1 16519201 to 16519260 59 - TSS region transcription start site region 11038
Tssr11039 1 16519284 to 16519336 52 - TSS region transcription start site region 11039
Tssr11040 1 16520023 to 16520039 16 - TSS region transcription start site region 11040
Tssr11041 1 16520067 to 16520095 28 - TSS region transcription start site region 11041
Tssr11042 1 16520106 to 16520133 27 - TSS region transcription start site region 11042
Ube2w 1 16540788 to 16619415 78627 - protein coding gene ubiquitin-conjugating enzyme E2W (putative)