Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:161352549-161752666

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr9685 1 161395431 to 161395439 8 + TSS region transcription start site region 9685
Tnfsf4 1 161395438 to 161418206 22768 + protein coding gene tumor necrosis factor (ligand) superfamily, member 4
Tssr9686 1 161395540 to 161395550 10 + TSS region transcription start site region 9686
Tssr9687 1 161396631 to 161396640 9 + TSS region transcription start site region 9687
Tssr9688 1 161396863 to 161396865 2 + TSS region transcription start site region 9688
Tssr9689 1 161417810 to 161417853 43 + TSS region transcription start site region 9689
Tssr9690 1 161494649 to 161494656 7 + TSS region transcription start site region 9690
Tnfsf18 1 161494657 to 161505290 10633 + protein coding gene tumor necrosis factor (ligand) superfamily, member 18
Gm31815 1 161517219 to 161591458 74239 - lncRNA gene predicted gene, 31815
Gm25488 1 161552549 to 161552666 117 - rRNA gene predicted gene, 25488
Gm5704 1 161597102 to 161598488 1386 + pseudogene predicted gene 5704
Cnes4 1 161621573 to 161621573 0 QTL C. neoformans susceptibility locus 4
Tssr14582 1 161647124 to 161647135 11 - TSS region transcription start site region 14582
Tssr9691 1 161701371 to 161701383 12 + TSS region transcription start site region 9691
D1Mit266.1 1 161703636 to 161703749 113 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 266.1
D1Mit266 1 161703778 to 161704023 245 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 266
Opfa 1 161703778 to 161704023 245 QTL open field activity
Tssr14583 1 161704659 to 161704679 20 - TSS region transcription start site region 14583
Tssr9692 1 161704823 to 161704834 11 + TSS region transcription start site region 9692
Tssr9693 1 161704865 to 161704871 6 + TSS region transcription start site region 9693
Tssr9694 1 161705497 to 161705516 19 + TSS region transcription start site region 9694
Tssr9695 1 161706069 to 161706073 4 + TSS region transcription start site region 9695
Cpgi927 1 161712996 to 161713168 172 CpG island CpG island 927
Gm37638 1 161713705 to 161714827 1122 + unclassified gene predicted gene, 37638
Gm15429 1 161726242 to 161727489 1247 - pseudogene predicted pseudogene 15429
Gm5049 1 161746185 to 161747645 1460 + pseudogene predicted gene 5049
Tssr9696 1 161747540 to 161747551 11 + TSS region transcription start site region 9696