Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:161160438-161653206

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ankrd45 1 161142691 to 161170498 27807 + protein coding gene ankyrin repeat domain 45
Cpgi925 1 161170592 to 161171070 478 CpG island CpG island 925
Tssr9683 1 161175601 to 161175620 19 + TSS region transcription start site region 9683
Tssr9684 1 161175629 to 161175641 12 + TSS region transcription start site region 9684
Gm6185 1 161178704 to 161235173 56469 + pseudogene predicted gene 6185
Prdx6 1 161240112 to 161251210 11098 - protein coding gene peroxiredoxin 6
Tssr14574 1 161241661 to 161241680 19 - TSS region transcription start site region 14574
Tssr14575 1 161241769 to 161241791 22 - TSS region transcription start site region 14575
Tssr14576 1 161243612 to 161243641 29 - TSS region transcription start site region 14576
Cpgi926 1 161250509 to 161251430 921 CpG island CpG island 926
Tssr14577 1 161250884 to 161250909 25 - TSS region transcription start site region 14577
Tssr14578 1 161251128 to 161251139 11 - TSS region transcription start site region 14578
Tssr14579 1 161251141 to 161251144 3 - TSS region transcription start site region 14579
Tssr14580 1 161251153 to 161251186 33 - TSS region transcription start site region 14580
Tssr14581 1 161251502 to 161251528 26 - TSS region transcription start site region 14581
Gm19057 1 161297833 to 161298905 1072 - pseudogene predicted gene, 19057
Tssr9685 1 161395431 to 161395439 8 + TSS region transcription start site region 9685
Tnfsf4 1 161395438 to 161418206 22768 + protein coding gene tumor necrosis factor (ligand) superfamily, member 4
Tssr9686 1 161395540 to 161395550 10 + TSS region transcription start site region 9686
Tssr9687 1 161396631 to 161396640 9 + TSS region transcription start site region 9687
Tssr9688 1 161396863 to 161396865 2 + TSS region transcription start site region 9688
Tssr9689 1 161417810 to 161417853 43 + TSS region transcription start site region 9689
Tssr9690 1 161494649 to 161494656 7 + TSS region transcription start site region 9690
Tnfsf18 1 161494657 to 161505290 10633 + protein coding gene tumor necrosis factor (ligand) superfamily, member 18
Gm31815 1 161517219 to 161591458 74239 - lncRNA gene predicted gene, 31815
Gm25488 1 161552549 to 161552666 117 - rRNA gene predicted gene, 25488
Gm5704 1 161597102 to 161598488 1386 + pseudogene predicted gene 5704
Cnes4 1 161621573 to 161621573 0 QTL C. neoformans susceptibility locus 4
Tssr14582 1 161647124 to 161647135 11 - TSS region transcription start site region 14582